Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01361 ATGGCAAGCCTGAAGGTTGCATGCATGGTTGCGGTGGTGTGCTTGGTGGTGGTGAGTGCACCCATGGCACATGCGATCACTTGCGGCCAAGTGACCAGTGCTGTGGCTCCATGCCTGACCTACATCCAGAAAGGCGGAGCCCCGTCGACAGCGTGCTGCAACGGAGTGAGGTCCCTGAACGCCGCCGCAAAGACCACTGCTGACCGCCGGGCCACGTGCACCTGCCTGAAAAACCTTGCCAGTGGGTTGGGCGGGAGTCTCAACCCGGTCAACGCAGCTTCACTCCCAGGCAAATGTGGTGTCAACGTCCCCTACAAGATCAGCACCTCCACAAACTGCAATACCATCAAGTTCTGA 357 0.591 MASLKVACMVAVVCLVVVSAPMAHAITCGQVTSAVAPCLTYIQKGGAPSTACCNGVRSLNAAAKTTADRRATCTCLKNLASGLGGSLNPVNAASLPGKCGVNVPYKISTSTNCNTIKF* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01361 118 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 5 114 IPR000528 GO:0006869|GO:0008289
Lapu10g01361 118 FunFam Non-specific lipid-transfer protein 25 117 - -
Lapu10g01361 118 Pfam Protease inhibitor/seed storage/LTP family 28 113 IPR016140 -
Lapu10g01361 118 ProSitePatterns Plant lipid transfer proteins signature. 95 116 IPR000528 GO:0006869|GO:0008289
Lapu10g01361 118 CDD nsLTP1 26 114 - -
Lapu10g01361 118 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Lapu10g01361 118 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Lapu10g01361 118 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Lapu10g01361 118 PRINTS Plant phospholipid transfer protein signature 104 115 IPR000528 GO:0006869|GO:0008289
Lapu10g01361 118 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Lapu10g01361 118 SMART aai_6 28 113 IPR016140 -
Lapu10g01361 118 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 116 IPR036312 -
Lapu10g01361 118 Gene3D - 25 118 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01361 Lapu-Chr10 20183219 20184954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01361 8 117 Acyl Lipid Metabolism Gene Families AT5G59320 51.818 2.31e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01361 - - gmx:100815185 159.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01740 1 30349902 30351436 Lapu10g01361 10 20183219 20184954 PCT