Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01696 ATGGGGATATTTGGTGTTCGCATTATTTCTTTGGTGCTTCTCTTGATGCTTACTAAAAATTTAAGTTCCAATGCATTTGATGGGAGTATGAAGGACGAGGAAGCACTCAAGGAAGGCCAAAATGAAATGGAAAATTCTATTTTAAATTATGGTGAAATGAGGGGTGCGAAAGATGATGATTGGCAGATGGTGCAAAAGAAGGGAAACCAATTTGTGGTGAATGACAAACCTTTCTATGTCAATGGATTCAACACATATTGGCTGATGGTATTTGCTGTAGATGAGTCCACCAGAGGAAAGGTCACTGAGGTGTTCAAGCAGGCAGCCTCAGTGGGTATGACAGTTTGTAGGACGTGGGCCTTCAATGATGGCCAATGGCGGGCCCTACAGAAATCTCCATCAGTCTATGATGAAGAAGTCTTCAAGGCCCTGGACTTTGTGGTAAGTGAAGCAAAGAAATACAAAATCAGGCTTATATTATCATTGGCTAACAACTGGGAGGCATATGGAGGCAAAGCACAATATGTGAAATGGGGCAATGCTGCTGGCCTTAACTTAACCTCTGATGATGACTTCTTCTCACATCCAACTCTTAGAAGCTACTACAAGGCCCATGTTAAGACTGTGCTCAATAGAGTTAACACATTCACAAACATTACTTACAAGGAGGATCCAACAATTTTTGCTTGGGAATTGATGAACGAGCCTCGTTGCACCTCAGATCCCACAGGTGACAAGTTACAGGATTGGATTCAAGAAATGGCATTCCAAGTGAAGAAAATTGATCCAAAACACCTAGTAGAGGTTGGACTAGAAGGATTTTATGGCCCATCAACACCTCAGAGAACTCAGTTCAATCCCAATACATATGCTACACAGGTTGGAACTGATTTTGTAAGGAACCACCTGGCACTTGGTGTGGACTTCGCTTCTGTTCATATATATGCTGACTCTTGGATTTCACAACAAATTGCTGATTCTCATCTCTCATTTATAAAATCATGGATGCAAGCCCACATAGAGGATGCTGAAAAGTATCTTGGAATGCCAGTTGTTTTTGCTGAGTTTGGTGTATCTTCCAAAGACCCTGGCTACAATTCATCATACAGAGATACACTCATAAGCACTGTGTACAATACCATCCTAAACTCCACAAAAAAAGGAGGGAGTGGGGCTGGAAGCCTTTTGTGGCAATTTTTTCCAGATGGAACTGATAACATGGACGATGGGTATGCTATTGTTCTCTCAAAATCTCCTTCTACCTCAAGCATTATACAACTTCAATCCACTAGGCTTGCGCTGTTCAATTCCTTGTGCAATACCAAATGCAATTGGGGATGTAAGAAGAAAATGTTGTTGGACAAAATACTCTATCACGATGAACTGTAA 1389 0.4132 MGIFGVRIISLVLLLMLTKNLSSNAFDGSMKDEEALKEGQNEMENSILNYGEMRGAKDDDWQMVQKKGNQFVVNDKPFYVNGFNTYWLMVFAVDESTRGKVTEVFKQAASVGMTVCRTWAFNDGQWRALQKSPSVYDEEVFKALDFVVSEAKKYKIRLILSLANNWEAYGGKAQYVKWGNAAGLNLTSDDDFFSHPTLRSYYKAHVKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSDPTGDKLQDWIQEMAFQVKKIDPKHLVEVGLEGFYGPSTPQRTQFNPNTYATQVGTDFVRNHLALGVDFASVHIYADSWISQQIADSHLSFIKSWMQAHIEDAEKYLGMPVVFAEFGVSSKDPGYNSSYRDTLISTVYNTILNSTKKGGSGAGSLLWQFFPDGTDNMDDGYAIVLSKSPSTSSIIQLQSTRLALFNSLCNTKCNWGCKKKMLLDKILYHDEL* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01696 462 PANTHER - 11 450 IPR045053 GO:0004553
Lapu1g01696 462 FunFam Mannan endo-1,4-beta-mannosidase 6 60 436 - -
Lapu1g01696 462 Gene3D Glycosidases 61 435 - -
Lapu1g01696 462 Pfam Cellulase (glycosyl hydrolase family 5) 74 375 IPR001547 GO:0004553|GO:0071704
Lapu1g01696 462 SUPERFAMILY (Trans)glycosidases 63 419 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01696 Lapu-Chr1 29887617 29890644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01696 58 462 Glycoside Hydrolase AT5G01930 73.219 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01696 K19355 - gmx:100811794 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01696 1 29887617 29890644 Lapu1g01696 1 29887617 29890644 ECH
Lapu1g01696 1 29887617 29890644 Lapu10g00749 10 9341053 9343574 PCT