Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00749 ATGGAAACACACGAGAGATCTGGATTACGTGCCATTTCCTTGGTCCTTTTTCTAATTCTTACTAAAAGTTTAAGCACAACTACGTTTGATGTCAGTGAATATGAAGATGGGGAAAGCGTTGATATAGCAGATTCTATCTTAAGTTTTGGAAATGAAATGGGAGACATGGAAGAAAATGAATGGCAGATGGTGCAAACGAAAGGAAACCAATTTGTGGTGAACGACCAACCGTTCTATGTTAATGGATTCAACACGTACTGGTTGATGGTATTTGCTGCGGACGAGTCCACCAGAGGAAAGGTCACTGAGGTGTTCAAACATGCATCTTCTGTGGGCATGTCAGTTTGTAGGACTTGGGCCTTCAATGATGGCCAATGGCGTGCTCTTCAGAAATCTCCATCAGTTTATGATGAAGTCGTGTTTAAGGCCTTGGATTTTGTGGTAAGTGAAGCAAAGAAATACAAAATTAGGCTCATATTGTCACTGGTTAACAACTGGGAGGCTTACGGTGGCAAAGCACAGTATGTGAAGTGGGGCAATACAGCTGGGCTTAACTTGACCTCTGATGATGACTTTTTTTCACATCCAACTCTCAGAAGCTACTACAAGGCTCATGTTAAGACGGTGCTCAATAGAGTTAATACGTTCACAAATATCACTTACAAGGAAGATCCGACCATTTTTGCTTGGGAATTGATGAATGAGCCTCGGTGTACCTCAGACTCCTCAGGTGATGTGTTACAGGATTGGATAAAAGAAATGGCATTCTATGTGAAAAGCATTGATACAAAACACCTAGTGGAGATTGGACTGGAGGGATTTTATGGGCCCTCGACACCTCAAAGATATCAGTTAAACCCAAATGCATATGCTCAACAGGTCGGAACTGATTTTATCAGAAACCACCAGGTTCTAGGTGTTGACTTCGCTTCTGTTCACATATATCCAGACTCTTGGATTTCACAATCAATTGCTGATTCTCACCTACCATTTATAAAGTCTTGGATGGAAGCGCACATAGAGGATGCTGAAAAGTATCTTGGAATGCCTGTTGTTTTCAGTGAGTTTGGTGTGTCTGCAAAAGCTCCTGGCTTCAATTCATCATACAGAGACAACCTTATAAACACTGTGTACAAGACACTCCTAAACTCTACCAAGAAAGGAGGTAGTGGGGCTGGAAGCCTTGTGTGGCAGCTCTTTCCTGATGGAACGGATTACATGGATGATGGGTATGCCATTGTTCTCTCAAAATCACCTTCCACGTCAAGCATTATATCCCTTCAATCCACAAGGCTAGCCCTCTTCAATTCCTTGTGCTCTAAGAAATGTCGTTGGGGTTGTAAGAAGAGAAATGTCTTGGAAAAATTGTGTGGCAATTTGTAA 1383 0.4201 METHERSGLRAISLVLFLILTKSLSTTTFDVSEYEDGESVDIADSILSFGNEMGDMEENEWQMVQTKGNQFVVNDQPFYVNGFNTYWLMVFAADESTRGKVTEVFKHASSVGMSVCRTWAFNDGQWRALQKSPSVYDEVVFKALDFVVSEAKKYKIRLILSLVNNWEAYGGKAQYVKWGNTAGLNLTSDDDFFSHPTLRSYYKAHVKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSDSSGDVLQDWIKEMAFYVKSIDTKHLVEIGLEGFYGPSTPQRYQLNPNAYAQQVGTDFIRNHQVLGVDFASVHIYPDSWISQSIADSHLPFIKSWMEAHIEDAEKYLGMPVVFSEFGVSAKAPGFNSSYRDNLINTVYKTLLNSTKKGGSGAGSLVWQLFPDGTDYMDDGYAIVLSKSPSTSSIISLQSTRLALFNSLCSKKCRWGCKKRNVLEKLCGNL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00749 460 Gene3D Glycosidases 61 435 - -
Lapu10g00749 460 FunFam Mannan endo-1,4-beta-mannosidase 6 60 436 - -
Lapu10g00749 460 SUPERFAMILY (Trans)glycosidases 63 419 IPR017853 -
Lapu10g00749 460 PANTHER - 15 452 IPR045053 GO:0004553
Lapu10g00749 460 Pfam Cellulase (glycosyl hydrolase family 5) 75 377 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00749 Lapu-Chr10 9341053 9343574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00749 15 451 Glycoside Hydrolase AT5G01930 70.548 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00749 K19355 - gmx:100801139 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01696 1 29887617 29890644 Lapu10g00749 10 9341053 9343574 PCT