Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01693 ATGGGGAATTGCGTGGCTAAGTCTCAAGCTAAGGATAGTGATTCTGACCATAATGTGGAGTTTGCTGCTGGCAATGTGAAACTTATTACCACCAAAGAAGCTTGGGACCAATATTTGGAAGAAGCAAGGAAGGATGGCAAAATTGTAATTGCGAATTTCAGTGCAACATGGTGTGGTCCTTGTAAGGTGATTGCGCCATATTACTGCGAGTTATCTGAGAAATACACATCCATAATGTTCTTGTTAGTTGACGTGGATGAACTAACTGATTTCAGCACTTCATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTAAAAGATGGACAACAACTTGACAAACTTGTAGGAGCCAACAAGCCAGAGCTGCAGAAGAAGGTTGTTGCCATCAATGATTCGCTTCCCGAATATAAGCAGTGA 420 0.419 MGNCVAKSQAKDSDSDHNVEFAAGNVKLITTKEAWDQYLEEARKDGKIVIANFSATWCGPCKVIAPYYCELSEKYTSIMFLLVDVDELTDFSTSWDIKATPTFFFLKDGQQLDKLVGANKPELQKKVVAINDSLPEYKQ* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01693 139 SUPERFAMILY Thioredoxin-like 22 127 IPR036249 -
Lapu1g01693 139 PANTHER THIOREDOXIN 26 127 - -
Lapu1g01693 139 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Lapu1g01693 139 FunFam Thioredoxin H9 1 138 - -
Lapu1g01693 139 CDD TRX_family 39 127 - -
Lapu1g01693 139 Pfam Thioredoxin 29 127 IPR013766 -
Lapu1g01693 139 Gene3D Glutaredoxin 1 137 - -
Lapu1g01693 139 PRINTS Thioredoxin family signature 96 107 - -
Lapu1g01693 139 PRINTS Thioredoxin family signature 57 66 - -
Lapu1g01693 139 PRINTS Thioredoxin family signature 49 57 - -
Lapu1g01693 139 ProSiteProfiles Thioredoxin domain profile. 8 132 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01693 Lapu-Chr1 29868241 29871909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01693 K03671 - gmx:100813401 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01693 1 29868241 29871909 Lapu1g01693 1 29868241 29871909 ECH
Lapu1g01693 1 29868241 29871909 Lapu10g00746 10 9327445 9331898 PCT