Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00746 ATGCTTGTAAAACAATTTTGTATATACCAGCTCGGTAAAGATAGTGATGGTGATTCTGATCATCATGTGGATTTTGCTTCTGGGAACGTGCAACTTATTACTACCAAAGAATCTTGGGACCAAAAGTTGGAACAAGCAAATAAGGATAGTAAAATTGTTATTGCAAATTTCAGTGCAACATGGTGTGGTCCTTGCAAAATGATTGCTCCATATTACTGCGAGTTGTCTGAGAAACACTCGTCTATCATGTTCTTGTTAATCGACGTGGATGAAATGGCTGACTTTAGCACTTCCTGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTAAAGATGGAAAAGAGCTTGACAAACTTGTAGGAGCCAACAAACCAGAGCTGGAGAAGAAGATTGCTGCGATTAATGATGTAGTTCCTCATCAGCAACACTGA 432 0.3935 MLVKQFCIYQLGKDSDGDSDHHVDFASGNVQLITTKESWDQKLEQANKDSKIVIANFSATWCGPCKMIAPYYCELSEKHSSIMFLLIDVDEMADFSTSWDIKATPTFFFLKDGKELDKLVGANKPELEKKIAAINDVVPHQQH* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00746 143 CDD TRX_family 43 132 - -
Lapu10g00746 143 ProSiteProfiles Thioredoxin domain profile. 1 136 IPR013766 -
Lapu10g00746 143 PANTHER THIOREDOXIN 30 132 - -
Lapu10g00746 143 FunFam Thioredoxin 26 136 - -
Lapu10g00746 143 ProSitePatterns Thioredoxin family active site. 54 72 IPR017937 -
Lapu10g00746 143 SUPERFAMILY Thioredoxin-like 25 133 IPR036249 -
Lapu10g00746 143 Pfam Thioredoxin 33 132 IPR013766 -
Lapu10g00746 143 PRINTS Thioredoxin family signature 100 111 - -
Lapu10g00746 143 PRINTS Thioredoxin family signature 61 70 - -
Lapu10g00746 143 PRINTS Thioredoxin family signature 53 61 - -
Lapu10g00746 143 Gene3D Glutaredoxin 6 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00746 Lapu-Chr10 9327445 9331898 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00746 K03671 - gmx:100527258 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01693 1 29868241 29871909 Lapu10g00746 10 9327445 9331898 PCT