Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01632 ATGGCACCCAACAACAACAGAACCAAGGGATCGCATTTTCCTCTTCTTGCCTTCCTCCTTCTGTGCCTCCTCGCGCCTCTTCTCTTCTTCTGCGCATCGCCGCTCCTTACTTTTCACGATCAAGGTGGTAATTTGGCTGTTACCAGCAGAAAGGTTGCCAGATTCAGAGAGTGGCAGTCATTGCAGGATCTTAAATCGGTTTTTCCGAAAGAGGTTCTTGATGTTATTGTTTCCAACACAAATGATGTGGGCCCTTTGAGTCTTCAGAGTTTTAGAAAAAATAATTTGTCGGCTTCATGGAGAGTTGTTGGATCAAAGGCTTCTAATGCTGCAAATCAGGTTAACGAACCAGCAAACAATGTAGGTCAAGAGAAGCAAAGGGGGAAGGAAGGAAGATTTTCAGATGGTCGTGCTCAGTGGACTGACAGTCCTGCACAGCTATCCAGAAGGCAATTAATAGAGAAAAGGAAGGAAAAGCGTGCTGCTGAGTTGGTGAAAGAGGATGATGAAGTAATTGTAAAACTTGAAGATTCAGCTATTGAACACTCGAAATCTGTTGATTCAGCAGTTCTAGGTAAATACAACATTTGGAGGAAAGAAAATGAGAATGAAAATGTTGATTCTACTGTACGGTTGATGCGAGACCAAATCATTATGGCTAAGGTTTACTTGAGTATTGCAAAGATGAAGGACAATCTTGAACTGTACCAAGAACTGGAATCTCAGCTTAAAGAAAGTCAGCGTGCTTTAGGTGAGGCAACTTCTGATGCTGAACTAAATCCGAGTGATCATGAAAAAATCAAAGCCATGGGCCAAGTTCTTTCCAAGGCAAAAGAGCAATTGTATGACTGCAATTTGGTTACTGGGAAATTGAGGGCAATGCTACAAACAGCTGATGAGCGGGTTAGGAGCTTGAGAAAACAAAGCACGTTCCTTAGTCAGTTGGCTGCCAAGACCATACCAGATGGAATTCACTGCTTATCTATGCGCCTTACCATAGACTACTTCCTCCTTCCTCTTGAACAGAGAAAATTCCCTAGAAGTGAGAATTTGGAGAATCCTAGTCTCTATCATTATGCTCTATTCTCGGACAATGTCTTGGCTGCATCTGTTGTTGTCAACTCAACTATTGTGAATGCAAAGGATCCTTCAAAGCATGTGTTTCACCTTGTTACCGATAAACTAAATTTTGGAGCCATGAACATGTGGTTTTTGTTGAATCCTCCTGGAAAAGCTACAATCAATGTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCATCCTACTGCCCAGTCTTGAGGCAGCTTGAATCTGCAACAATGAAAGAGTATTATTTCAAGGCAGGCCATCCGACTACTACTGGTGCTTCGAATCTCAAGTATAGAAATCCAAAATATCTGTCAATGCTCAACCACCTGAGATTCTATCTTCCACAAGTTTATCCAAAATTGGATAAGATTCTTTTTCTTGATGATGACATTGTTGTCCAGAAGGATCTGACTGGTTTATGGGCTGTGAATCTTCAAGGAAAAGTAAATGGTGCTGTTGAAACATGTGGGGAGAGTTTTCACCGATTCGACAAGTACCTTAACTTTTCAAATCCACTTATTGCAAAAAATTTTGATCCAAATGCTTGTGGTTGGGCATACGGGATGAACATGTTTGATTTGAAGGTGTGGAAAAAGAAGGACATCACTGGCATATATCACAAGTGGCAGAATTTGAATGAAGACAGGGTGCTGTGGAAGTTGGGGACATTGCCTCCTGGGCTGATGACATTCTATGGATTAACACATCCGCTAAATAAATCATGGCATGTGCTTGGTCTGGGTTACAATCCAAGTGTAGATCGTTCGGAGATCGATAATGCGGCAGTTGTGCACTACAATGGTAACATGAAGCCATGGTTGGAGATAGCCATGACAAAGTATCGGCCTTACTGGACCAAATATGTAAAATTTAATCATCCCTATCTTCAGACTTGTAAGCTACGTGAATGA 2001 0.4143 MAPNNNRTKGSHFPLLAFLLLCLLAPLLFFCASPLLTFHDQGGNLAVTSRKVARFREWQSLQDLKSVFPKEVLDVIVSNTNDVGPLSLQSFRKNNLSASWRVVGSKASNAANQVNEPANNVGQEKQRGKEGRFSDGRAQWTDSPAQLSRRQLIEKRKEKRAAELVKEDDEVIVKLEDSAIEHSKSVDSAVLGKYNIWRKENENENVDSTVRLMRDQIIMAKVYLSIAKMKDNLELYQELESQLKESQRALGEATSDAELNPSDHEKIKAMGQVLSKAKEQLYDCNLVTGKLRAMLQTADERVRSLRKQSTFLSQLAAKTIPDGIHCLSMRLTIDYFLLPLEQRKFPRSENLENPSLYHYALFSDNVLAASVVVNSTIVNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATINVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAGHPTTTGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWAVNLQGKVNGAVETCGESFHRFDKYLNFSNPLIAKNFDPNACGWAYGMNMFDLKVWKKKDITGIYHKWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYNPSVDRSEIDNAAVVHYNGNMKPWLEIAMTKYRPYWTKYVKFNHPYLQTCKLRE* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01632 666 SUPERFAMILY Nucleotide-diphospho-sugar transferases 357 663 IPR029044 -
Lapu1g01632 666 Coils Coil 226 256 - -
Lapu1g01632 666 CDD GT8_like_1 357 653 - -
Lapu1g01632 666 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 359 660 IPR029044 -
Lapu1g01632 666 MobiDBLite consensus disorder prediction 115 140 - -
Lapu1g01632 666 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 159 664 IPR029993 GO:0047262
Lapu1g01632 666 Pfam Glycosyl transferase family 8 326 640 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01632 Lapu-Chr1 29173691 29178947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01632 10 666 Glycosyltransferase AT3G61130 72.382 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01632 K13648 - gmx:100798073 1212.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01632 1 29173691 29178947 Lapu10g00019 10 1147515 1156849 PCT