Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00019 ATGACGCCGAGGCGAGGGTTTTCCTTCGCCAAGAACCGAGGCAAGGGCTCCTGCTTCCCCGTTCTCGGTTTCGTTCTCCTCTGCGTTCTTGCGCCGGTGGTTTTCTTCCTCGCTCGGGGACTCTACGCTGCAGATCAAGATTATATTTCAGATGTACCACGTAAACAGGTTAGCAAATGGAGAGAATGGCAGGCATTGCAGGATCTTAAATCACTTTTTTCAGACGAGGTTCTTAATGTTATTGCATCCAGCACAAATGATATGGGACCTTTCAGTCTTGACAATTTCAGAAAGAATTTGTCTGCTTCATGGAGAGTTGTTGGATTAGAAACTTCAAACACTGGACATGAGCTAAACCAACCAGCACATGTTAGACAAGAAAAGCCAAAGGTGAAGGAAGGAAGATCTTCAGATGGTCTTCCTCTGTGGACTGATAGTCCTGCACAGGAAACCCGAAGGCATTTAATTGAGAAAAGGCGGGAAAAGCGTGCTGCCGAGCTGGTAAAAAAGGATGATGAAGTAACTGTAAAACTTGAAAATGCAGCTATTGAACGCTCAAAATCTGTTGAGTCAGCGGTTCTAGGTAAATACAACATTTGGAGGAAAGAAATTGAGAATGAAAATGGTGATTCTACTGTTCGGTTAATGCGAGACCAGATCATTATGGCTAGGGTATATTTAAGCATTGCAAAGATGAAGAACAAGGTCGAACTGTATCAAGAACTAATTTTCCGGCTCAAAGAGAGTCAACGTGCCTTAGGTGATACAGTTTCTGATGCAGATCTACATCACAGTGCACATGGGAAAATAAAGGCTATGGGTCAAATTTTGTCAAAAGCAAGAGAGCTATTGTATGACTGCAAGTTGGTCACTGGAAAACTAAGAGCTATGCTAAATACAGCTGATGATCAAGTTAGGAGTTTGAAGAAACAGAGCACATTCCTCAGTCAGTTGGCTGCCAAGACCATACCAAATGGAATCCATTGCTTATCCATGCGCCTTACCATAGATTACTACCTCCTTCCTCCTGAAAAGAGAAAATTCCCTAGGAGTGAGAATTTGGAGAATCCCAGTCTTTATCACTATGCACTGTTTTCAGACAATGTCTTGGCTGCATCTGTTGTTGTCAACTCCACTATTACAAATGCAAAGGATCCTTCAAAGCATGTTTTTCACCTTGTTACTGATAAACTAAATTTTGGTGCCATGAACATGTGGTTTCTATTGAACCCTCCTGGAAAAGCTACAATCCATGTTGAAAATGTTGATGAGTTTAAGTGGTTGAACTCGTCCTACTGCCCAGTCTTGCGGCAGCTTGAATCTTCTACAATGAAAGAGTATTATTTCAAGGCAGGCCATCCCAACACACTTTCTTTCGGTGCTTCCAATCTGAAGTATAGGAATCCAAAATATCTCTCAATGCTCAACCATCTGAGATTCTATCTTCCTCAGGTTTATCCAAAGTTGGATAAAATCCTATTTCTTGATGATGACATTGTTGTTCAGAAGGATTTGACTGGATTATGGACTGTGGATCTTAATGGGAAAGTAAATGGTGCTGTTGAAACGTGTGGTGAGAGCTTTCACCGATTTGACAAGTACCTTAACTTTTCAAATCCGCATATTGCAAGAAATTTTGATCCAAATGCCTGTGGTTGGGCATATGGGATGAACATATTTGATCTGAAGGAGTGGAAAAAGAAGGACATCACCGGTATATATCACAAGTGGCAGAATATGAATGAAGACAGGGTGCTGTGGAAGCTGGGGACATTACCTCCAGGGCTAATGACGTTCTATGGGTTGACACATCCGCTAGATAAATCATGGCATGTGCTTGGTTTGGGTTATAATCCAAGTGTGGATCGATCAGAGATTGATAATGCAGCAGTTGTACACTACAACGGTAATATGAAGCCATGGTTAGAAATTGCCATGACAAAGTATCGGCCTTACTGGATCAAATATGTCAAGTACAACCATCCCTATCTTCGGACCTGTAAGCTAAATGAATAA 2016 0.4167 MTPRRGFSFAKNRGKGSCFPVLGFVLLCVLAPVVFFLARGLYAADQDYISDVPRKQVSKWREWQALQDLKSLFSDEVLNVIASSTNDMGPFSLDNFRKNLSASWRVVGLETSNTGHELNQPAHVRQEKPKVKEGRSSDGLPLWTDSPAQETRRHLIEKRREKRAAELVKKDDEVTVKLENAAIERSKSVESAVLGKYNIWRKEIENENGDSTVRLMRDQIIMARVYLSIAKMKNKVELYQELIFRLKESQRALGDTVSDADLHHSAHGKIKAMGQILSKARELLYDCKLVTGKLRAMLNTADDQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPEKRKFPRSENLENPSLYHYALFSDNVLAASVVVNSTITNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESSTMKEYYFKAGHPNTLSFGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWTVDLNGKVNGAVETCGESFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYGLTHPLDKSWHVLGLGYNPSVDRSEIDNAAVVHYNGNMKPWLEIAMTKYRPYWIKYVKYNHPYLRTCKLNE* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00019 671 SUPERFAMILY Nucleotide-diphospho-sugar transferases 360 668 IPR029044 -
Lapu10g00019 671 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 164 669 IPR029993 GO:0047262
Lapu10g00019 671 Pfam Glycosyl transferase family 8 329 645 IPR002495 GO:0016757
Lapu10g00019 671 MobiDBLite consensus disorder prediction 115 144 - -
Lapu10g00019 671 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 362 665 IPR029044 -
Lapu10g00019 671 MobiDBLite consensus disorder prediction 121 135 - -
Lapu10g00019 671 CDD GT8_like_1 360 658 - -
Lapu10g00019 671 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00019 Lapu-Chr10 1147515 1156849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00019 1 671 Glycosyltransferase AT3G61130 72.714 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00019 K13648 - gmx:100811181 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00019 10 1147515 1156849 Lapu10g00019 10 1147515 1156849 ECH
Lapu1g01632 1 29173691 29178947 Lapu10g00019 10 1147515 1156849 PCT