Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01617 ATGGGTCACTCCAATTCTTCGTCGCCGTCCAAGCGCGGCCACGCGCGACAGTGGCGGCTCCTGGACCTCGTCTCCGGCGTGCTATTCTTCCTTGTGCTGCTCTTCTTCGTCATGGTGTTCACCCCGCTCGGCGACTCGCTCGCCGCCTCGGGTCGCCAGACGCTGCTCCTCTCCGGCGCCGACTCCCGGCATCGCCACCAGCTAGTGGAGGCGGTTGAGACAGCTGGGCGCGGCGTGGAGGCGTGCCCCGCCGATACAGCGGACTACATGCCGTGCGAGGATCCGAGGCTGAACAGCCAACTCAGCAGGGAGATGAACTACTACAGGGAGAGGCATTGCCCCAGGCCGGAGGACTCGCCACTCTGCTTGATTCCGCCGCCGAACGGGTACCAGGTGCCGGTGCCGTGGCCGGAGAGCTTGCACAAGATATGGCACAGCAACATGCCATACAACAAGATTGCGGACAGGAAAGGTCACCAGGGATGGATGAAACTAGAAGGTCAACATTTTATATTCCCTGGTGGTGGTACAATGTTTCCAGATGGAGCAGAGCAATATATTGAAAAACTTAGCCAATACATTCCAATAAGTGGAGGTGTTCTGAGGACTGCACTTGACATGGGGTGTGGGGTTGCTAGTTTTGGAGGATTTTTGCTATCTCACAATATTTTAACCATGTCTTTTGCTCCAAGAGATTCTCATAAAGCTCAAATACAATTTGCCTTGGAAAGAGGAATACCAGCTTTTGTTGCTATGCTTGGTACTCGAAGACTCCCATTTCCTGCATTTGGATTTGACTTAGTTCATTGCTCTAGGTGTTTGATCCCGTTTACAGCCTACAATGCCTCTTATTTCATTGAAGTGGACAGATTACTTCGTCCTGGTGGATATTTAGTTATCTCTGGTCCCCCTGTTCAGTGGCCTAAACATGATAAAGAATGGTCTGATCTCCAGTCTGTGGCCAGAGCCTTGTGTTATGAACTGATTGCTGTAGATGGTAACACTGTGATCTGGAAGAAGCTTGCAGGAGAAACATGTCTTCCGAATGATAATGAATTTGGTCTTGAGTTATGTGATGAATCAGATGACCCAAGTCAAGCTTGGTACTTCAAATTGAAGAAATGTGTCAGTAGGACATCTGTTAAAGGAGATTATGCTATTGGGGTAATTCCCAAGTGGCCGGAGAGATTAACTACAACACCTCCAAGATCCACACTCCTGAAAAATGGTGTTGATTTGTATGAGGCTGACACTAAGAGATGGGTAAGGAGGGTGGCACACTATAAGAATTATCTAAAAATCAAGTTGGGCACTCGATCTGTACGCAATGTCATGGACATGAATGCATTATTTGGGGGTTTTGCTGCGGCCTTAAGTTCTGATCCTGTGTGGGTGATGAATGTAGTTCCTGCTCAAAAGCCACCCACTCTTGATGTTATCTTTGACAGAGGCCTTATTGGAGTCTATCATGATTGGTGTGAACCATTTTCAACATACCCTCGTAGCTATGATCTAATCCACGTGGCCAGCATTGAGTCCCTTATAAAAGATCCAGCTTCTGGTAAAAACAGATGTACTCTTGTTGATTTGATGGTGGAAGTTGATCGAATGTTGCGTCCTGAGGGAACTGTGGTGGTGAGGGATGCCCCTGAAGTAATCGACAAAGTAGCTCGCATTGCTGGAGCAGTAAGGTGGAATCCTACCGTTTATGATAAAGAACCTGAATCACACGGCAAAGAAAAGATTCTAGTTGCAACCAAGACTTTCTGGAAGCTCTAA 1779 0.4817 MGHSNSSSPSKRGHARQWRLLDLVSGVLFFLVLLFFVMVFTPLGDSLAASGRQTLLLSGADSRHRHQLVEAVETAGRGVEACPADTADYMPCEDPRLNSQLSREMNYYRERHCPRPEDSPLCLIPPPNGYQVPVPWPESLHKIWHSNMPYNKIADRKGHQGWMKLEGQHFIFPGGGTMFPDGAEQYIEKLSQYIPISGGVLRTALDMGCGVASFGGFLLSHNILTMSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFGFDLVHCSRCLIPFTAYNASYFIEVDRLLRPGGYLVISGPPVQWPKHDKEWSDLQSVARALCYELIAVDGNTVIWKKLAGETCLPNDNEFGLELCDESDDPSQAWYFKLKKCVSRTSVKGDYAIGVIPKWPERLTTTPPRSTLLKNGVDLYEADTKRWVRRVAHYKNYLKIKLGTRSVRNVMDMNALFGGFAAALSSDPVWVMNVVPAQKPPTLDVIFDRGLIGVYHDWCEPFSTYPRSYDLIHVASIESLIKDPASGKNRCTLVDLMVEVDRMLRPEGTVVVRDAPEVIDKVARIAGAVRWNPTVYDKEPESHGKEKILVATKTFWKL* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01617 592 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 314 IPR029063 -
Lapu1g01617 592 FunFam probable methyltransferase PMT13 176 340 - -
Lapu1g01617 592 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 61 590 IPR004159 GO:0008168
Lapu1g01617 592 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 88 587 IPR004159 GO:0008168
Lapu1g01617 592 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 420 560 IPR029063 -
Lapu1g01617 592 Gene3D Vaccinia Virus protein VP39 177 333 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01617 Lapu-Chr1 28968734 28975917 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01617 K23872 - gmx:100782539 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01617 1 28968734 28975917 Lapu1g01617 1 28968734 28975917 ECH
Lapu1g01617 1 28968734 28975917 Lapu10g00069 10 2167157 2172596 PCT