Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00069 ATGGGTCACGTCAACCTCCCCGCATCCAAGCGCGTGGGCGGCCAGCGCCAGTGGCGCGTCCTGGACCTCGTCACCGCGGCGTTCTTCGGCCTCGTTGTCCTCTTCTTCGTCCTCGTCTTCACCTCCATGGGAGACTCCCTCGCCGCCTCCGGCCGCCAGACGCTGCTCCTCTCCACCTCCGATCCGCTCCAGCGCCTCCGCGTTTCGGCGGCCATCGAGGCCGGGCAGACGCGAGTGATCGAGGCGTGCCCCATCGACACCGCCGACCACATGCCGTGCGAGGATCCGAAGCTGAACAGCCAGCTGAGCAGGGAGATGAATTACTACCGAGAGAGGCATTGCCCGCCGCTGGAAAACACGCCGCTCTGCCTCGTCCCGCCGCCCCGCGGGTACAAGGTGTCGGTGCAGTGGCCGGAGAGCTTGCACAAGATATGGCATAGCAACATGCCATACAACAAGATTGCTGACAGGAAAGGTCACCAGGGATGGATGAAGCTTGAAGGTCCACACTTTATATTCCCTGGAGGTGGCACAATGTTTCCAGATGGAGCAGAGCAGTATATTGAAAAACTTGGTCAATACATTCCAATGAAGGGTGGTGTTCTGAGGACTGCTCTTGATATGGGATGTGGGGTTGCCAGTTTTGGAGGATATTTACTAGCTCAAAACATATTAACCATGTCTTTTGCTCCAAGAGATTCACACAAATCACAGATACAATTTGCGCTTGAAAGAGGAATACCAGCTTTTGTTGCCATGCTTGGTACTCGCAGACTACCGTTTCCGGCATTTGGATTTGACTTAGTCCATTGTTCTCGGTGTTTAATCCCTTTTACAGCCTACAATGCAACTTATTTCATTGAAGTGGACAGATTACTTCGACCTGGTGGATATTTAGTTATTTCTGGCCCCCCTGTTCAATGGCCTAAGCAAGATAAAGAATGGTCAGATCTTCAGGCTGTGGCAAGAGCATTGTGTTATGAGCTGATTGCTGTAGATGGTAACACTGTGATCTGGAAAAAGCCAGCAGTGGACATGTGTCTCCCCAACCAAAATGAATTTGGTCTAGACATGTGTGATGATTCAGATGACCCAAGTTTAGCATGGTACTTCAAATTGAAGAAATGTGTCACTAGGTTGTCTTCTATCAAAGGTGAATATACTGTTGGTACAATTGCCAAATGGCCAGAAAGGCTAACTGCTCCTCCTGTAAGGTCCACAGTCCTGAAAAATGGTGCTGATGTATATGAGGCTGACACTAAGCGATGGGTGAGAAGACTTTCACACTATAAGAATTCTCTAAAAATAAAGTTGGGGACTCCAGCAATACGCAATGTTATGGACATGAATGCATTTTTTGGGGGATTTGCGGCAGCACTGAATTCTGATCCTGTGTGGGTAATGAATGTTGTTCCATCTCACAAGCCACCAACTCTTGATGCAATCTTTGATAGAGGCCTTATTGGAGTCTATCATGATTGGTGTGAACCTTTCTCAACCTATCCTCGCACCTATGATCTGATCCATGCAACAAGCATTGAATCACTTATAAAGGATCCTGCCTCTGGCAAAAACAGATGTAACCTTGTTGATTTGATGGTCGAATTGGATCGAATTTTACGCCCGGAAGGAACTCTGGTGGTGAGGGATACCCCTGAAGTAATTGAAAGAGTAGCTCGTGTTGCACGTGCAGTGAGGTGGAAGCCCACCATATATAATAAAGAACCCGAATCACACGGCAGGGAGAAAATTCTAGTTGCAACCAAGACCTTGTGGAATCTCTAA 1785 0.4874 MGHVNLPASKRVGGQRQWRVLDLVTAAFFGLVVLFFVLVFTSMGDSLAASGRQTLLLSTSDPLQRLRVSAAIEAGQTRVIEACPIDTADHMPCEDPKLNSQLSREMNYYRERHCPPLENTPLCLVPPPRGYKVSVQWPESLHKIWHSNMPYNKIADRKGHQGWMKLEGPHFIFPGGGTMFPDGAEQYIEKLGQYIPMKGGVLRTALDMGCGVASFGGYLLAQNILTMSFAPRDSHKSQIQFALERGIPAFVAMLGTRRLPFPAFGFDLVHCSRCLIPFTAYNATYFIEVDRLLRPGGYLVISGPPVQWPKQDKEWSDLQAVARALCYELIAVDGNTVIWKKPAVDMCLPNQNEFGLDMCDDSDDPSLAWYFKLKKCVTRLSSIKGEYTVGTIAKWPERLTAPPVRSTVLKNGADVYEADTKRWVRRLSHYKNSLKIKLGTPAIRNVMDMNAFFGGFAAALNSDPVWVMNVVPSHKPPTLDAIFDRGLIGVYHDWCEPFSTYPRTYDLIHATSIESLIKDPASGKNRCNLVDLMVELDRILRPEGTLVVRDTPEVIERVARVARAVRWKPTIYNKEPESHGREKILVATKTLWNL* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00069 594 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 89 589 IPR004159 GO:0008168
Lapu10g00069 594 Gene3D Vaccinia Virus protein VP39 178 332 IPR029063 -
Lapu10g00069 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 315 IPR029063 -
Lapu10g00069 594 FunFam probable methyltransferase PMT13 177 341 - -
Lapu10g00069 594 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 73 592 IPR004159 GO:0008168
Lapu10g00069 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 424 561 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00069 Lapu-Chr10 2167157 2172596 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00069 K23872 - gmx:100812418 1092.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00069 10 2167157 2172596 Lapu10g00069 10 2167157 2172596 ECH
Lapu1g01617 1 28968734 28975917 Lapu10g00069 10 2167157 2172596 PCT