Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01616 ATGGCCAACTGGGCAACCCTAGTTCACAACTGTGTTTCCAAGAAGCAAAACAAACAACTCACAAGACTCTACCTTCTCACCTTCACCACCTTCCTCTGCACCCTCTTCTACCTCCTCGGTCTCTGGCACCACTCTTCACCCTCTCTAGCCGCCGTTTCCGCAGCCACAAACCTCGCCGGCCGACGCAACTGCCCCGACCCAACTTCTAATTTCCTCTCCAATCCCATTTCCAATTCAACTTTGGATTTTTCCGCCACCCATTTTCCTCCCGATCCCGAGGAGACGTCGCGTGAGTTCCACGCGCCGCCGTGTGATTCGACGCTGGCGGAGTACACTCCCTGCGAGGACGTGAACCGGTCACTGGGATTCCCCCGTGAGGATCTGATCTACCGCGAGCGGCACTGCCCCGTGGAGGCGGAGTTGCTCCGGTGCCGGATTCCGGCGCCGTTCGGATATCGCGTGCCGCTGCGGTGGCCGGAGAGCCGCGACGCCGCGTGGTTCGCGAACGTGCCTCACAAGGAGTTGACCGTGGAGAAGAAGAACCAGAACTGGGTTCGGTTTGAGGGGGACCGGTTCAGGTTTCCTGGGGGTGGGACCATGTTTCCACGTGGCGCAAGCGCGTACATTGATGACATCGGAAAACTCATTCATCTAAATGATGGGTCCATCCGAACCGCCTTAGACACTGGCTGTGGGGTTGCAAGTTGGGGAGCATATCTTCTGTCACGTGACATTTTAGCAGTGTCATTTGCACCAAGAGATACACATGAAGCTCAAGTTCAATTCGCTCTTGAACGAGGGGTTCCTGCATTGATTGGAGTTCTTGCCTCAATTAGGCTTCCTTACCCTTCTAGGGCCTTTGACATGGCACACTGCTCACGTTGCCTCATTCCCTGGGGCCAGAATGAGGGGATTTATTTGACTGAAGTTGATCGAGTGCTGCGTCCTGGTGGTTACTGGATTCTTTCAGGGCCACCGATAAATTGGGAGAGCCACTGGAAAGGTTGGGAGAGGACTCGTGAGAGTCTCAAAGAGGAACAGGATACAATTGAGAAAGTGGCAAAAAGCCTATGCTGGAAAAAAGTGTCGCAAAAGGGTGACCTTGCCATATGGAAGAAGCCCACCAATCATATACATTGCAAAATAACAAGAAAAGTCTTCAAGACTAGACCCTTTTGTGCGGCAAAGGATCCAGACACAGCATGGTACACAAAAATGGAGACCTGCTTGACACCACTGCCAGAGGTGAATGATGTCGATGAAGTTAGTGGTGGCAAATTGTCAAATTGGCCTGAGAGATTAACGTCAGTCCCACCAAGGGTTAGTAGTGGAAGCTTGAAGGGAATTACGGTAGACATGTTTAAAGAAAACAATGAGTTATGGAAGAAGAGAGTAGCATACTACAAGACCCTGGACTATCAGCTAGCAGAGCGTGGCAGATACCGTAATCTGCTTGATATGAATGCTTACTTGGGAGGCTTTGCAGCTGCACTGATTGATGATCCTGTGTGGGTCATGAACATTGTCCCTGTTGAGGCTGGGGTCAACACACTTGGTGCCATATATGAACGTGGATTAATTGGAACCTACCAAAATTGGTGTGAAGCCATGTCCACATACCCAAGAACTTATGACTTCATACACGGTGATTCAGTTTTTAGCCTCTATCAAAACAGGTGTAAAATGGAGGACATTCTTCTAGAGATGGATAGAATTTTGCGGCCACAGGGCAGTGTCATCTTGCGTGATGATGTGGATGTGTTGTTGAAGGTGAAGCATTTTGCAGATGCAATGCAATGGGATTCCAGAATTGCAGACCATGAAAAGGGGCCTCACCAGAGAGAAAAGATATTCTTTGCAGTTAAGCAATACTGGACTGCTCCACCCCCTGACCAAAAATCAACATAG 1908 0.5016 MANWATLVHNCVSKKQNKQLTRLYLLTFTTFLCTLFYLLGLWHHSSPSLAAVSAATNLAGRRNCPDPTSNFLSNPISNSTLDFSATHFPPDPEETSREFHAPPCDSTLAEYTPCEDVNRSLGFPREDLIYRERHCPVEAELLRCRIPAPFGYRVPLRWPESRDAAWFANVPHKELTVEKKNQNWVRFEGDRFRFPGGGTMFPRGASAYIDDIGKLIHLNDGSIRTALDTGCGVASWGAYLLSRDILAVSFAPRDTHEAQVQFALERGVPALIGVLASIRLPYPSRAFDMAHCSRCLIPWGQNEGIYLTEVDRVLRPGGYWILSGPPINWESHWKGWERTRESLKEEQDTIEKVAKSLCWKKVSQKGDLAIWKKPTNHIHCKITRKVFKTRPFCAAKDPDTAWYTKMETCLTPLPEVNDVDEVSGGKLSNWPERLTSVPPRVSSGSLKGITVDMFKENNELWKKRVAYYKTLDYQLAERGRYRNLLDMNAYLGGFAAALIDDPVWVMNIVPVEAGVNTLGAIYERGLIGTYQNWCEAMSTYPRTYDFIHGDSVFSLYQNRCKMEDILLEMDRILRPQGSVILRDDVDVLLKVKHFADAMQWDSRIADHEKGPHQREKIFFAVKQYWTAPPPDQKST* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01616 635 FunFam Putative methyltransferase PMT15 179 373 - -
Lapu1g01616 635 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 376 IPR029063 -
Lapu1g01616 635 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 30 625 IPR004159 GO:0008168
Lapu1g01616 635 Gene3D Vaccinia Virus protein VP39 174 395 IPR029063 -
Lapu1g01616 635 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 110 622 IPR004159 GO:0008168
Lapu1g01616 635 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 469 602 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01616 Lapu-Chr1 28955898 28961390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01616 - - gmx:100817472 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01616 1 28955898 28961390 Lapu10g00064 10 2098254 2105903 PCT