Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00064 ATGGCAAACACTAATAACTTCTTAACCCAACTCTTAAATTGCACTTCAAAAAAGCCAAACACCATATTCACCAACCTCTACCTCCTCACCTTTGCCACCTTCCTCTGCACCCTCTTTTACTTCCTTGGCCTATGGCACAACTACCCCACCACCACCATCGCCACCGCCGCCGCCACCACCACCATCGCCACCGCCTCCGCCACCACCACCTCCTCCCTCTGCTTCAACCGCAACTCTACCACCACTACCTCCACCGTCACTGTCCCATCATTGACCAAACTCGAATTCGCCTCCCACCACAACCTCCCGGACCCGCCACCAACGGCGGCGCGTGGGCCACATCTCCCTCCCTGCGCGTGGTCCTTCTCCGAGTACACCCCCTGCGAGGACCAGATGCGCTCTCTTCAGTTCCCGAGAGCCCGATTCGCCTACCGTGAGCGGCACTGTCCGGCGGCGAAGGATGTACTCCGTTGCCGGATTCCGGCGCCATACGGATACAAACAGCCGCTTCGGTGGCCGGCGAGCCGCGACGCCGCGTGGTTCGCGAACGCGCCGCACAAAGAGTTGACTGTGGAGAAGAAGGGGCAGAACTGGGTCCGGTTCGAGGGGGACCGGTTCAAGTTCCCCGGTGGTGGGACCATGTTTCCACGTGGCGCAGATCGCTACATTGATGACATTGGGAAGCTTATTAATCTCCGAGATGGGTCTATCCGAACCGCTATCGACACCGGTTGTGGGGTTGCAAGCTTTGGAGCTTATCTTCTATCACGAAACGTTTTAACAGTGTCATTTGCACCAAGAGATACTCATATATCACAGGTTCAATTTGCTCTTGAACGAGGTGTTCCTGCATTGATTGGAATTCTTGCCTCAATCAGGCTTCCATACCCTTCAAGGGCCTTTGACATGGCTCATTGCTCAAGGTGCCTCATTCCTTGGGGCAAGTATGATGGAGTATACTTGACTGAAGTAGACAGAGTGTTACGTCCAGGGGGGTATTGGATTCTATCAGGGCCGCCAATAAACTATGAGAATCATTGGAAGGGCTGGGAAAGAACTCGAGAGAGTCTAAAAGATGAACAGGATGAAATTGAGGATGTGGTAAAGAGTCTATGCTGGAAAAAGTTGGTGCAGAAGGATGACCTTGCAATATGGCAGAAGCCAACCAATCATGTACATTGCAAACTGAAGAGAAAGATCTTCAAGACTGGTAGACCCTTCTGTGGTGAGGCACAGGATCCAGACACAGCATGGTACACTAAGCTGGATACATGTTTGACCCCACTTCCTGAGGTAAAGGACATCAAAGAAATTAGTGGTGGAGGACTGGCTAACTGGCCTGATAGACTAACATCAATTCCCCCAAGGATTAGGAGTGAAAGTTTGGAAGGAATAACAGCTAAGATGTTCACAGAAAACACTCGGTTATGGAAAAAGAGAGTGGCATACTACAAGAGATTGGACCATCAGCTAGCAGAACGTGGGAGATATAGAAATCTGCTTGATATGAATTCTTACTTGGGAGGCTTTGCAGCTGCACTGGTAGATGATCCTGTGTGGGTTATGAACATTGTCCCTGTTGAAGCAGAAATCAACACCCTTGGTGTTGTATATGAACGTGGATTGATTGGAACCTATCAAAACTGGTGTGAAGCCATGTCCACTTACCCGCGAACATATGACTTCATACACGGTGATTCAGTTTTTAGCCTCTACCAGAACAGATGTGATATGGTGGACATTCTTCTAGAGATGGACAGAATTTTGAGGCCACAAGGTAGTGTCATTTTGAGAGATGATGTGGATGTGTTGACGAAGGTCAAGAGCATTGCAGATGAAATGCAATGGGATGCTAGAATTACAGACCATGAAGAGGGACCTTATGAGAGACAGAAGATACTGATAGCAGTTAAGGAATATTGGACAGCACCTCCTCCAGAGAGAAACCAACACAGCAAGCACTAG 1965 0.4962 MANTNNFLTQLLNCTSKKPNTIFTNLYLLTFATFLCTLFYFLGLWHNYPTTTIATAAATTTIATASATTTSSLCFNRNSTTTTSTVTVPSLTKLEFASHHNLPDPPPTAARGPHLPPCAWSFSEYTPCEDQMRSLQFPRARFAYRERHCPAAKDVLRCRIPAPYGYKQPLRWPASRDAAWFANAPHKELTVEKKGQNWVRFEGDRFKFPGGGTMFPRGADRYIDDIGKLINLRDGSIRTAIDTGCGVASFGAYLLSRNVLTVSFAPRDTHISQVQFALERGVPALIGILASIRLPYPSRAFDMAHCSRCLIPWGKYDGVYLTEVDRVLRPGGYWILSGPPINYENHWKGWERTRESLKDEQDEIEDVVKSLCWKKLVQKDDLAIWQKPTNHVHCKLKRKIFKTGRPFCGEAQDPDTAWYTKLDTCLTPLPEVKDIKEISGGGLANWPDRLTSIPPRIRSESLEGITAKMFTENTRLWKKRVAYYKRLDHQLAERGRYRNLLDMNSYLGGFAAALVDDPVWVMNIVPVEAEINTLGVVYERGLIGTYQNWCEAMSTYPRTYDFIHGDSVFSLYQNRCDMVDILLEMDRILRPQGSVILRDDVDVLTKVKSIADEMQWDARITDHEEGPYERQKILIAVKEYWTAPPPERNQHSKH* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00064 654 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 124 638 IPR004159 GO:0008168
Lapu10g00064 654 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 33 641 IPR004159 GO:0008168
Lapu10g00064 654 FunFam Putative methyltransferase PMT15 193 387 - -
Lapu10g00064 654 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 386 IPR029063 -
Lapu10g00064 654 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 480 604 IPR029063 -
Lapu10g00064 654 Gene3D Vaccinia Virus protein VP39 195 392 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00064 Lapu-Chr10 2098254 2105903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00064 - - gmx:100813493 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00064 10 2098254 2105903 Lapu10g00064 10 2098254 2105903 ECH
Lapu1g01616 1 28955898 28961390 Lapu10g00064 10 2098254 2105903 PCT