Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01557 ATGGCGAAGGAAGAAGTGTTTGAGTTCCTCGGGAACGTTCCTCTGCTGCAGAGGCTTCCTAGCTCGTCTGTACGGAAGATATCTGAGCTTGTAGTTCCCAAATATTATGAGCCGAGAGAGTATGTTGTTCGTGAGGGAGAGCGTGGGGATGGTCTTTACTTCATCTGGGAAGGAGAGGCTGAGGTTGTTGACTCTGTTAGTGCTGATGATGATAATCATCCAGAGTTTCAATTGAAAAGATATGACTACTTTGGTTTTGGTTTATCAAATGAAGTTCACCACGCCGATGTCATAGCTTTGACGAAGTTATCATGCTTGGTACTGCCCCATGAGCATTCAGCATTGCTGCAATCGAAGTCTATCTGGAGTGCAGAAAAATCTGTTGATACATGCTCACCTGTGGAGCATATATTGCATTTGGAACCTATAGAGGTAGATATCTTCCGAGGAATCACTCCGCCAGATGCTCCAAAATTTGGAAAAGTATTTGGCGGACAAATAGTTGGGCAGGCACTGGCTGCGGCATCAAAATCTGTTGATTGTCTTAAAGTTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAACATACCCATTATATATCAAGTTAGCCGTCTACGTGATGGGAAGAGTTTTGCTACTAGGAAAGTGGATGCAATTCAAAAGGGAAACGTCATATTCACTTTGCTGGCTTCATTTCATAAAGAAGAATTAGGGTTTCACCACCAGGAAGCGTCTATCCCATCAGTTCCTGCTCCAAATAAGCTTTTGTCATTGGAAGAGCTTCGGGAGCTACGTCTCACCGACCCTCGCCTTCCAAGAACTTACCGTAACAAGGTTGCTACAGTTGAATTCATTCCCTGGCCCATCGAGATACGGTTCTGTGAACCTAAAACTTCAACAAATCAGACCAAATCTCCTCCTAGTTTGAGATACTGGTTCAGAGCAAGGGGAAAACTTTCTGATGATCAGGCCTTGCATAGGTGTGTGGTAGCATATACTTCAGATCTAATATTTCTTCAAGTGAGTTTGAATCCCAACCGTAGGAAGGGCATGAAGGCACGCGCTGTGAGTCTGGACCACTCTATGTGGTTTCACAGACCTTTGAGAGCTGATGACTGGGTGCTATTTGTGATCTTCAGTCCTACTTCTTCTAATGCCCGTGGCTATGTTACTGGCCAAATGTTCAATCAAAAGGGAGAGCTTCTTGTATCAGTGGTTCAAGAAGGTCTCATGAGGGAAGTTGTTTCTGCAAATTCAGCCATCAAATCTAATCTGTAA 1290 0.438 MAKEEVFEFLGNVPLLQRLPSSSVRKISELVVPKYYEPREYVVREGERGDGLYFIWEGEAEVVDSVSADDDNHPEFQLKRYDYFGFGLSNEVHHADVIALTKLSCLVLPHEHSALLQSKSIWSAEKSVDTCSPVEHILHLEPIEVDIFRGITPPDAPKFGKVFGGQIVGQALAAASKSVDCLKVVHSLHVYFLLVGDFNIPIIYQVSRLRDGKSFATRKVDAIQKGNVIFTLLASFHKEELGFHHQEASIPSVPAPNKLLSLEELRELRLTDPRLPRTYRNKVATVEFIPWPIEIRFCEPKTSTNQTKSPPSLRYWFRARGKLSDDQALHRCVVAYTSDLIFLQVSLNPNRRKGMKARAVSLDHSMWFHRPLRADDWVLFVIFSPTSSNARGYVTGQMFNQKGELLVSVVQEGLMREVVSANSAIKSNL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01557 429 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 42 58 IPR018488 -
Lapu1g01557 429 Pfam Thioesterase-like superfamily 160 415 - -
Lapu1g01557 429 SMART cnmp_10 15 132 IPR000595 -
Lapu1g01557 429 Gene3D Jelly Rolls 1 128 IPR014710 -
Lapu1g01557 429 CDD CAP_ED 15 112 IPR000595 -
Lapu1g01557 429 SUPERFAMILY cAMP-binding domain-like 4 112 IPR018490 -
Lapu1g01557 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 131 240 IPR029069 -
Lapu1g01557 429 FunFam Acyl-CoA thioesterase II 1 124 - -
Lapu1g01557 429 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Lapu1g01557 429 NCBIfam acyl-CoA thioesterase II 138 416 IPR003703 GO:0006637|GO:0047617
Lapu1g01557 429 Pfam Cyclic nucleotide-binding domain 34 111 IPR000595 -
Lapu1g01557 429 Gene3D - 129 418 IPR042171 -
Lapu1g01557 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 248 416 IPR029069 -
Lapu1g01557 429 CDD Thioesterase_II_repeat2 146 238 - -
Lapu1g01557 429 FunFam Acyl-CoA thioesterase II 129 419 - -
Lapu1g01557 429 CDD Thioesterase_II_repeat1 313 415 - -
Lapu1g01557 429 PANTHER ACYL-COA THIOESTERASE 119 417 IPR003703 GO:0006637|GO:0047617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01557 Lapu-Chr1 28400918 28410585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01557 1 417 Acyl Lipid Metabolism Gene Families AT1G01710 69.065 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01557 K01068 - gmx:100805018 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01557 1 28400918 28410585 Lapu1g01557 1 28400918 28410585 ECH
Lapu1g01557 1 28400918 28410585 Lapu10g00113 10 2781806 2797328 PCT