Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00113 ATGGACAACGAGAAAGCGTTTGAGTTTCTCGGACGCGTTCCTCTTCTGCAGAGGCTTCCAAGCTCGTCTGTGAGGAAGATATCTCAACTTGTGGATGTCAAAAGCTGTGAGCCGGGAGAGTATGTTGTTCGTGAGGGTGAACATGGAGATGGCGTGTACTTCATATTCGATGGAGAGGCTGAGGTTGTTGGATCCGTTAGTGCCAATGATGAAAATCGCCCAGAGTTCCAGTTAAAAAGATATGACTACTTTGGTTATGGTTTGTCAAACACAGTTCACCAGGCAGGTGTTGTTGCTTTGTCTAAGCTGACATGCTTAGTGCTTCCTCATGAGCACTCAACACTGCTGCAGCCCAAATCTATCTGGAGAGCAGAAAATTATGTCGAGACATGCTCACCTGTGGAGAAAATATTGCATTTGGAACCCATGGAGGTAGATATCTTCCAAGGAATTACCCTTCCAGATGCTCCAAGATTTGGAAAGGTGTTTGGGGGGCAGATGATTGGACAGGCACTGGCCGCGGCATCAAAATCTGTTGACTGTCTAAAGGTTGTTCATAGTTTGCATGCCTATTTTATTCTTGCGGGGGATTTAAAAATGCCAATTACATATAAAGTTTATCGTATCCGTGATGGGAGGAGCTTTGCTACAAGGAAAGTAGACGGAATTCAAAAGGGAATTGTCATATTCACTCTGTTGGCTTCATTTCAAAAAGAAGAAACGGGGATGATCCACCAGAAAGTAGCTATACCATCTGTCCCATCTCCAGATAAGCTTCTGCCAATGGAAGAGCTACGGGAGAGACGTCTTACTGATCCTCGTTTACCAGTAAACTACCGGAACAAAGTAGCTACATCTCAATTCATCCCCTGGCCCATAGAGATACGATTATGTGAATACGAATTTTCAACAAACATGACAAAATCTCCTCCCAGTTTGAGATACTGGTTTAGAGCAAAGGGAAAACTTTCAGATGATCAAGCCTTGCATAGGTGCGTGGTGGCATTTGCTTCAGATCTAATATTTCTTCAAGTAAGCTTGAATCCCCACCGTGAGAAGGGTTTCAGGACACGTTCTGTTAGTCTGGACCACTCTATGTGGTTTCACCGATCTGTAAAGGCTGATGATTGGATGCTATTTGTGATCTTTACTCCCAGTGCCCATAGTGCACGCGTCTTTGTGACCGGTCAAATGTTCAATCAGAAGGGAGAGCTTCTTGTATCATTGGTTCAAGAAGGACTAGCCAGGAAAATTAATCAAGGAAATTCAGCCATTAAATCTAAGTTGTGA 1290 0.438 MDNEKAFEFLGRVPLLQRLPSSSVRKISQLVDVKSCEPGEYVVREGEHGDGVYFIFDGEAEVVGSVSANDENRPEFQLKRYDYFGYGLSNTVHQAGVVALSKLTCLVLPHEHSTLLQPKSIWRAENYVETCSPVEKILHLEPMEVDIFQGITLPDAPRFGKVFGGQMIGQALAAASKSVDCLKVVHSLHAYFILAGDLKMPITYKVYRIRDGRSFATRKVDGIQKGIVIFTLLASFQKEETGMIHQKVAIPSVPSPDKLLPMEELRERRLTDPRLPVNYRNKVATSQFIPWPIEIRLCEYEFSTNMTKSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFLQVSLNPHREKGFRTRSVSLDHSMWFHRSVKADDWMLFVIFTPSAHSARVFVTGQMFNQKGELLVSLVQEGLARKINQGNSAIKSKL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00113 429 Pfam Cyclic nucleotide-binding domain 34 111 IPR000595 -
Lapu10g00113 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 248 417 IPR029069 -
Lapu10g00113 429 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 42 58 IPR018488 -
Lapu10g00113 429 CDD Thioesterase_II_repeat1 313 414 - -
Lapu10g00113 429 CDD CAP_ED 15 112 IPR000595 -
Lapu10g00113 429 PANTHER ACYL-COA THIOESTERASE 112 417 IPR003703 GO:0006637|GO:0047617
Lapu10g00113 429 Gene3D - 130 418 IPR042171 -
Lapu10g00113 429 Gene3D Jelly Rolls 2 129 IPR014710 -
Lapu10g00113 429 SMART cnmp_10 15 132 IPR000595 -
Lapu10g00113 429 SUPERFAMILY cAMP-binding domain-like 6 112 IPR018490 -
Lapu10g00113 429 CDD Thioesterase_II_repeat2 146 238 - -
Lapu10g00113 429 FunFam Acyl-CoA thioesterase II 1 124 - -
Lapu10g00113 429 Pfam Thioesterase-like superfamily 161 414 - -
Lapu10g00113 429 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Lapu10g00113 429 FunFam Acyl-CoA thioesterase II 129 419 - -
Lapu10g00113 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 130 242 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00113 Lapu-Chr10 2781806 2797328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00113 1 429 Acyl Lipid Metabolism Gene Families AT1G01710 63.636 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00113 K01068 - gmx:100797680 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00113 10 2781806 2797328 Lapu10g00113 10 2781806 2797328 ECH
Lapu1g01557 1 28400918 28410585 Lapu10g00113 10 2781806 2797328 PCT