Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01549 ATGAATAAATCATCCAACTTTGATGAAAATTCTGAGTTGGGTTATCACCCTTCACCTTCCAATACTGCTTTTTCCCCTATGAGTCGAGATTCTTTCGCATATTGCCAAACTTGGACAAGCTCAGAGTCTGAGACTGTAGATGACAGTAGCTATGCCAGTGAACCTTCACCTTCTCGGTGGAGGGATAAGCAAGATGTTCTTTCAAAGCTAGGAATGAAGCTTCGCAAGCATTCAATTGATGATAAACTTGGTGGCAGTGATCTCTTTGATTCAGCTGAGCTTGAACTGATGAAGGAAAGATTTGCAAAGCTTTTGCTGGGAGAAGACATGTCTGGTGGTGGGAAAGGAGTTTGTACTGCTGTTACAATCTCAAATGCCATTACCAATCTCTATGCAACTGTATTCGGACAAAGTTTAAAGTTGGAACCACTAAAGCCCGAGAAGAAGGCTATGTGGATAAGGGAAATGAAGGTTCTCTTATCAGTCTGTGATTACATACAAGAATTTGCTCCTACTGCACAATATTTAGAAGATGGCACAATTGTGGAGATGATGAAAAGCAGGCCAAGGTCAGACATCTACGTCAACCTCCCTGCACTGCAGAAGCTTGATACAATGCTCATAGAAATATTAGATACTTTCCAGGACACTGAATTTTGGTATGCAGAGAACATACCAGGGAATTCGAGTCGATTACGTGGGGCATCATGTCGAAGAACTGTTCCAAGGAAAGATGAGAAATGGTGGTTGCCAGTTCCTTGCGTTCTTCCTGGTGGCCTCTCTGACATGTCAAAAAAGCATCTGATAGAGAAAAGGGATTGTGCTAATCAAATCCATAAAGCAGCCATGGCAATAAACAGCAATGTTCTTGCAGAAATAGATATCCCGGAAAATTATATAGATAATCTTCCCAAGCTGAAATTCTATTGCCAAGTGATTGAGGATTCAATTAAATGTGACCCCATAAAGCAAATGTCTTGGAATTTATCATCAAATTTCATAAGCCTTTTATGGAAGCCAATAATAGCAGCCGATTCTTGTAGAAAACGGGATGATATAGTTTCAATTAAGAGCGGAAGATCAAGTCTAGGGGACTCAATTTACCACTACATGTATAATGCAGACAAATTCTCACCTGAACAACTTCTTAACTGTCTCAAAATAAGTTCTGAACGTGAAGCACTTGAGTTAGCTGACAGGGTTGAATCATCAATGTACACTTGGAGACGCAAGGCTTGTCTGAGCCATTCAAAGTCATCATGGAGCAAAGTAAAGGATCTCATTGAAGAGACAGACTGTAAGGACAAAAACTACACCTTAGCGGAGAGAGCTGAGTCTTTATTGCTTTGCCTGAAGCAAAGATATCCTGAACTTTCACAAACTTCTTTGGACACATGCAAGATCCAATACAACCGGGATGTAGGGAAAGCAGTACTTGAAAGTTATTCTAGAGTTTTGGAAAGCCTAGCGTTCAACATTGTGGCATGGATGGAAGATGTTCTTTATGTAGACAGAACAATGAGGAATAGAGAGGTTTAG 1539 0.4048 MNKSSNFDENSELGYHPSPSNTAFSPMSRDSFAYCQTWTSSESETVDDSSYASEPSPSRWRDKQDVLSKLGMKLRKHSIDDKLGGSDLFDSAELELMKERFAKLLLGEDMSGGGKGVCTAVTISNAITNLYATVFGQSLKLEPLKPEKKAMWIREMKVLLSVCDYIQEFAPTAQYLEDGTIVEMMKSRPRSDIYVNLPALQKLDTMLIEILDTFQDTEFWYAENIPGNSSRLRGASCRRTVPRKDEKWWLPVPCVLPGGLSDMSKKHLIEKRDCANQIHKAAMAINSNVLAEIDIPENYIDNLPKLKFYCQVIEDSIKCDPIKQMSWNLSSNFISLLWKPIIAADSCRKRDDIVSIKSGRSSLGDSIYHYMYNADKFSPEQLLNCLKISSEREALELADRVESSMYTWRRKACLSHSKSSWSKVKDLIEETDCKDKNYTLAERAESLLLCLKQRYPELSQTSLDTCKIQYNRDVGKAVLESYSRVLESLAFNIVAWMEDVLYVDRTMRNREV* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01549 512 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 31 510 IPR038937 GO:0005085
Lapu1g01549 512 MobiDBLite consensus disorder prediction 40 63 - -
Lapu1g01549 512 FunFam Rop guanine nucleotide exchange factor 2 352 470 - -
Lapu1g01549 512 MobiDBLite consensus disorder prediction 1 26 - -
Lapu1g01549 512 FunFam Rop guanine nucleotide exchange factor 14 379 512 - -
Lapu1g01549 512 FunFam Rop guanine nucleotide exchange factor 14 86 318 - -
Lapu1g01549 512 MobiDBLite consensus disorder prediction 40 57 - -
Lapu1g01549 512 Gene3D PRONE domain, subdomain 1 471 505 - -
Lapu1g01549 512 Gene3D PRONE domain, subdomain 1 89 327 - -
Lapu1g01549 512 ProSiteProfiles PRONE domain profile. 84 512 IPR005512 GO:0005085
Lapu1g01549 512 Gene3D PRONE domain, subdomain 2 357 470 - -
Lapu1g01549 512 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 93 306 IPR005512 GO:0005085
Lapu1g01549 512 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 357 508 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01549 Lapu-Chr1 28301327 28308597 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01549 - - gmx:100806086 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01549 1 28301327 28308597 Lapu1g01549 1 28301327 28308597 ECH
Lapu1g01549 1 28301327 28308597 Lapu10g00564 10 7902135 7904706 PCT