Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00564 ATGGTTAAACCAATGGAACAAGAACAGGAGGGTTACAGGTCCAAACTGTTCAATTTCAAAGGAATGTTTGACAGTACAGGGAAGCATACAAAGAGTTTGAGCGTTGAGAGTGCCACCACATTAGATCCTGCTCCTTCAGAGGAAGATCCAATGTCATCAAGAAGTCAAGGATCTAAACCTCCGAATGATCAAGATAAGATTCCCAAGCCAAGGGTAAACAAGGAGGAAATTGTAGCCAAAGAAGCCAAGGACAAACTAATGCAAGCTGCTGTTTTTGGAGAGCAAAAGCGCCTAGAACCAATGCCGCCAGAAAGGAAGGCAAGATGGAGAAAAGAAATTGATTGGCTTCTATCAGTCACCGATTACATTGTTGAAATGGTTCCTGTGCAACAAAAAAACAAGGATGGCTCAACCATGGAGGACAGTCTGGATAACTTCAAAGACCAAAATGAGTTCTATTATGTATCAAAGGATGCAGATGATCCAGATAATAGAAAAAATGATAACAAGTGGTGGTTGCCTACACCCAAGGTTCCCCCAGAGGGTCTATCTGATGCAGCAAGAAGGTTTGTTCAGTATCAGAAAGATTGTGTGAACCAAGTACTTAAAGCAGCTATGGCCATAAATGCTCAAACTCTATCAGAAATGGAGATCCCTGAAAGCTATATCGAGTCCCTGCCCAAGGCAAGTCAAAAGGAACTAAATGGAAGATCAAGTCTAGGGGACATGATATACAGGAGCATTACAGAAGAATTTTTCGACCCTGATCAGCTCCTGGCATCTATGGACATGTCATCAGAACACAAAATCCTAGATCTCAAGGACAGAATTGAGGCATCCATTGTGATTTGGAGACGGAAGATGAACCAAAAAGATTGTAAATCATCTTGGGGTTCTGCTGATGTGGGGCAAGCTGTTCTTGAAAGTTATTCAAGGATATTGGAGAGTTTAGCCTTCACAGTGCTGTCAAGAATAGAAGATGTACTCCACGCAGATTACCTCACTCAAAATCCATCACAATCAAGTAGAAGAAGTGTTTCGAGAAACACAAATTCCAAGCCAGAAAAGTCTCCAACTCCTAAAGAAGAGATGGAAAAGGGTGGCTCAGAAACAATGACTCTATCAGATTTCATGGGTTGGAGCAGTGATCAAGGTGAATCAGACCCTAAGAAAGACGCCTCAGATGACTACTACAGTGACATGGATACTGGAAAGCCCCCAAAACTTCCAGACGTAGTGACCGAGAAGAAAGTGTCCTACCTTGAGACATTGGGAGGTATGAGAAGTCCAACAGCACGCCATTAA 1305 0.4253 MVKPMEQEQEGYRSKLFNFKGMFDSTGKHTKSLSVESATTLDPAPSEEDPMSSRSQGSKPPNDQDKIPKPRVNKEEIVAKEAKDKLMQAAVFGEQKRLEPMPPERKARWRKEIDWLLSVTDYIVEMVPVQQKNKDGSTMEDSLDNFKDQNEFYYVSKDADDPDNRKNDNKWWLPTPKVPPEGLSDAARRFVQYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKASQKELNGRSSLGDMIYRSITEEFFDPDQLLASMDMSSEHKILDLKDRIEASIVIWRRKMNQKDCKSSWGSADVGQAVLESYSRILESLAFTVLSRIEDVLHADYLTQNPSQSSRRSVSRNTNSKPEKSPTPKEEMEKGGSETMTLSDFMGWSSDQGESDPKKDASDDYYSDMDTGKPPKLPDVVTEKKVSYLETLGGMRSPTARH* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00564 434 Gene3D PRONE domain, subdomain 2 217 287 - -
Lapu10g00564 434 ProSiteProfiles PRONE domain profile. 1 342 IPR005512 GO:0005085
Lapu10g00564 434 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 88 140 IPR038937 GO:0005085
Lapu10g00564 434 MobiDBLite consensus disorder prediction 355 369 - -
Lapu10g00564 434 MobiDBLite consensus disorder prediction 25 41 - -
Lapu10g00564 434 MobiDBLite consensus disorder prediction 336 354 - -
Lapu10g00564 434 Gene3D PRONE domain, subdomain 1 300 333 - -
Lapu10g00564 434 Gene3D PRONE domain, subdomain 1 88 215 - -
Lapu10g00564 434 MobiDBLite consensus disorder prediction 336 414 - -
Lapu10g00564 434 MobiDBLite consensus disorder prediction 385 402 - -
Lapu10g00564 434 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 300 336 IPR005512 GO:0005085
Lapu10g00564 434 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 87 140 IPR005512 GO:0005085
Lapu10g00564 434 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 141 298 IPR005512 GO:0005085
Lapu10g00564 434 MobiDBLite consensus disorder prediction 23 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00564 Lapu-Chr10 7902135 7904706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00564 - - gmx:100777496 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00564 10 7902135 7904706 Lapu10g00564 10 7902135 7904706 ECH
Lapu1g01549 1 28301327 28308597 Lapu10g00564 10 7902135 7904706 PCT