Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01545 ATGGTTTCACTTGGAGCTTCCTGTGCTGTGTGTTGTTCTGTGTTCATGATGCTTGTCACTTTGAGTTTTGCTGGGGACATAGTGCACCATGATAATATTGCTCCCAAGAGGCCTGGCTGTGAGAACAACTTTGTCCTGGTTAAAGTTCCGACTTGGATTGATGGTGTGGAAAGCTGTGAGTACGTTGGCGTTGGTGCAAGGTTTGGCCCTACATTGGAATCAAAAGAAAAACGTGCTAACCATACCAGAATTGCAATTGCAGACCCTCCTGATTGTTGTAGCCAACCTAAGAATAAGCTCACTGGCGAGATCATTTTGGTGCACCGAGGACAGTGTAGTTTCACAACCAAGGCAAATATAGCTGAAAAAGCTGGTGCTTCAGCCATGCTGATTATAAATTACCGTACAGAACTTTTCAAGATGGTTTGTGAAGCAAATGAAACCGATGTTGATATTGGAATACCTACTGTCATGCTTCCACAAGATGCTGGTGAAAACTTGGAAAATCACATACTAAACAATTCAGTGGTGTCGGTGCAGTTGTATTCTCCATATCGTCCATTGGTTGATGTTGCAGAAGTGTTTTTATGGCTTATGGCTGTTGGTACTATTCTCTGTGCTTCTTACTGGTCTGCCTGGACTGCGAGAGAGTCTGCCATTGAGCAGGAGAAGCTATTAAAGGATGCTTCAGATGAATATGTAAATGCAGAGAATGCTGGTTCCAGTGCTTATGTGGAAATCAGTACTGCAGCAGCGATATCATTTGTTGTGATTGCTTCTTGTTTCTTGGTTATGCTTTACAAATTAATGGCATCATGGTTTGTTGAAGTTCTGGTGGTTCTATTTTGCATTGGTGGGGTTGAGGGACTACAAACTTGCTTGGTGGCTCTGTTATCATGTTTCAGATGGTTCCAGCATGCTGCACAAACATTTGTGAAAGTACCCTTCTTTGGTGCTGTATCATATCTGACAGTTGCTGTTACTCCCTTCTGCATAGTGTTTGCTGTGCTTTGGGGTGTTTATCGCCATGTATCATTTGCTTGGATTGGTCAAGATATTCTTGGTATCACATTGATAATTACAGTTCTTCAGATTGTGCGGATACCAAATCTCAAGGTTGGAACTGTTCTTCTCAGTTGTGCCTTCCTGTATGACATCTTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTCATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGATGGTATCCCCATGCTGCTCAAGATACCGCGTATGTTTGATCCTTGGGGTGGCTACAGCATCATTGGTTTTGGCGACATCATCTTACCAGGGCTTCTAGTTGCATTTTCACTAAGGTATGATTGGTTAGCAAAGAAGAACCTTCGAAATGGATACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGTCTCCTTATCACATACTTGGCTTTGAACTTGATGGATGGACATGGTCAACCTGCTTTGCTTTATATAGTCCCGTTTACACTTGGAACCTTTTTGTCATTAGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGACAAGAGGGGAACCAAAAATACCTTGCCCTCACATCCAAGAGGATCAATCAACAAACCAGTAA 1620 0.4265 MVSLGASCAVCCSVFMMLVTLSFAGDIVHHDNIAPKRPGCENNFVLVKVPTWIDGVESCEYVGVGARFGPTLESKEKRANHTRIAIADPPDCCSQPKNKLTGEIILVHRGQCSFTTKANIAEKAGASAMLIINYRTELFKMVCEANETDVDIGIPTVMLPQDAGENLENHILNNSVVSVQLYSPYRPLVDVAEVFLWLMAVGTILCASYWSAWTARESAIEQEKLLKDASDEYVNAENAGSSAYVEISTAAAISFVVIASCFLVMLYKLMASWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFQHAAQTFVKVPFFGAVSYLTVAVTPFCIVFAVLWGVYRHVSFAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKIPRMFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRNGYFLWAMTAYGLGLLITYLALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKVLWTRGEPKIPCPHIQEDQSTNQ* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01545 539 SUPERFAMILY PA domain 99 139 IPR046450 -
Lapu1g01545 539 Pfam PA domain 90 167 IPR003137 -
Lapu1g01545 539 SMART psh_8 243 512 IPR006639 GO:0004190|GO:0016020
Lapu1g01545 539 PANTHER SIGNAL PEPTIDE PEPTIDASE 69 531 IPR007369 GO:0004190|GO:0016020
Lapu1g01545 539 FunFam Signal peptide peptidase-like 3 46 185 - -
Lapu1g01545 539 Gene3D - 40 184 - -
Lapu1g01545 539 Coils Coil 219 239 - -
Lapu1g01545 539 Pfam Signal peptide peptidase 243 523 IPR007369 GO:0004190|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01545 Lapu-Chr1 28241474 28248334 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01545 K09597 - gmx:100808921 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01545 1 28241474 28248334 Lapu1g01545 1 28241474 28248334 ECH
Lapu1g01545 1 28241474 28248334 Lapu10g00126 10 2961552 2970336 PCT