Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00126 ATGGTTTCACTTGGAGCTGTACATAGTGTGGTCTATGTGCTCCTGCTTTCAGTCACTTTGGTGTTGGGCGGGGACATAGTTCACCATGATGATGTTGCCCCCATAAGGCCTGGTTGTGACAACAACTTTGTTTTGGTAAAAGTCCCCACTTGGATTGATGGTGTGGAAAAAAGTGAATATGTTGGTGTTGGTGCAAGATTTGGCCCTACATTGGAATCAAAAGAAAAACGCGCCAATCTTACCAGAGTTGTCATGGCTGATCCTCCTGATTGTTGTACAAAGCCTAAGAACAAACTCACCAGCGAGATAATTTTGGTGCACCGAGGAAAATGCAGTTTCACTACAAAAGCAAATATTGCTGATGAAGCTGGTGCTTCAGCCATCCTCATTATAAACTACCGTACAGAACTTTTCAAGATGGTTTGTGAAGAAAATGAAACTGATGTTGATATCGGAATACCTGCTGTCATGCTTCCCCAAGATGCTGGATTGACTTTGGAAAGGCATATTAAAAATAACTCCAATGTGTCCATACAGTTATACTCTCCATTGCGTCCACTGGTTGATGTTGCGGAAGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTTTATGTGCTTCGTATTGGTCTGCCTGGAGTGCTAGAGAAGCAGCTATAGAGCAAGAGAAGCTCTTAAAGGATGCTACAGATGACTATGCTAATACAGAAAATGTTGGTTCCAATGGTTATGTGGAAATTAGTACTGTAGCAGCAATTTTATTCGTCGTGATTGCTTCATGTTTCTTGGTTATGCTGTATAAATTAATGTCCTTCTGGTTTGTTGAAGTTCTGGTGGTTCTGTTTTGCATTGGCGGGGTAGAGGGACTGCAAACTTGTTTGGTGGCCCTGTTGTCATGTTTCAGATGGTTTCGTCAACCTGCCCAGACATTTGTGAAGATACCCTTCTTTGGAGCTGTCTCATATCTGACACTTGCTGTTACTCCATTCTGCATAGTGTTTGCCGTGGTTTGGGCGGTTTATCGCCGTGCATCATGGGCTTGGATTGGTCAGGATATCCTCGGTATCACATTGATAATTACAGTTCTTCAGATTGTTCGCATACCAAATCTAAAGGTTGGAACTGTTCTTCTCAGTTGTGCATTCCTATATGACATCTTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGTGGTGATAAGAGTGGAGAAGATGGCATCCCCATGCTTCTCAAGATACCTCGTCTATTTGACCCTTGGGGTGGTTACAGTATCATAGGATTTGGGGACATAATCTTACCAGGACTTATAGTGGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAACCTTCGCGCTGGATACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGTCTCCTTGTAACATATGTGGCTTTGAACTTGATGGATGGGCATGGTCAGCCAGCTTTGCTTTATATAGTTCCATTTACACTTGGCACCTTTTTGTCATTGGGAAAAAAGAGAGGTGAGCTCAAGATTTTATGGACAAGAGGGGAACCAGAAAGGCCTTGCTGTCATATCCAAGAGGATAATCAATCAATTAATAGCCACCATTGA 1626 0.4268 MVSLGAVHSVVYVLLLSVTLVLGGDIVHHDDVAPIRPGCDNNFVLVKVPTWIDGVEKSEYVGVGARFGPTLESKEKRANLTRVVMADPPDCCTKPKNKLTSEIILVHRGKCSFTTKANIADEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQDAGLTLERHIKNNSNVSIQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWSAREAAIEQEKLLKDATDDYANTENVGSNGYVEISTVAAILFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFRQPAQTFVKIPFFGAVSYLTLAVTPFCIVFAVVWAVYRRASWAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLIVAFSLRYDWLAKKNLRAGYFLWAMTAYGLGLLVTYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGEPERPCCHIQEDNQSINSHH* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00126 541 Pfam PA domain 89 166 IPR003137 -
Lapu10g00126 541 SUPERFAMILY PA domain 98 136 IPR046450 -
Lapu10g00126 541 Gene3D - 41 183 - -
Lapu10g00126 541 Pfam Signal peptide peptidase 242 522 IPR007369 GO:0004190|GO:0016020
Lapu10g00126 541 PANTHER SIGNAL PEPTIDE PEPTIDASE 69 527 IPR007369 GO:0004190|GO:0016020
Lapu10g00126 541 SMART psh_8 242 511 IPR006639 GO:0004190|GO:0016020
Lapu10g00126 541 FunFam Signal peptide peptidase-like 3 45 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00126 Lapu-Chr10 2961552 2970336 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00126 K09597 - gmx:100795197 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00126 10 2961552 2970336 Lapu10g00126 10 2961552 2970336 ECH
Lapu1g01545 1 28241474 28248334 Lapu10g00126 10 2961552 2970336 PCT