Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01503 ATGCGTGTGAGTTTGGGTGTTAAAGTGTCGTTTGGTGTTATCGGTGTGAGTGTGATATTTGCAGCGCTGAAAATGTCGCAGTTGTTGGACAAAGCTAAGAACTATGTTTCGGAGAAAGTGACGAACATGCCGAAGCCAGAGGCGAGTGTCTCCGACGTGGATTTCACGCGCGTCAGCCGCGACAGCGTCCTGTACTTGGCCAAGGTTTCTGTCTCCAACCCTTATTCGACTCCCATTCCTATTTGTGAGATCAAGTACTCCTTCAAAAGTGCTGGCAGGGAGATAGCATCAGGGACAATACCAGACCCAGGGTCACTGAAGGCAAAAGACTCAACAATGGTGGATGTGCCAGTGAAGGTGCCTCACACTGTATTACTGAGCTTGGCAAGGGACATTGGTGCAGATTGGGACATTGATTATCAATTGGATATTGGTCTCATCATTGACCTTCCTGTCATTGGCAACTTCACCATTCCTCTTTCTCAGAAGGGAGAGATCAAGCTTCCCACCCTCAGAGACATGTTTGCTTAA 531 0.4802 MRVSLGVKVSFGVIGVSVIFAALKMSQLLDKAKNYVSEKVTNMPKPEASVSDVDFTRVSRDSVLYLAKVSVSNPYSTPIPICEIKYSFKSAGREIASGTIPDPGSLKAKDSTMVDVPVKVPHTVLLSLARDIGADWDIDYQLDIGLIIDLPVIGNFTIPLSQKGEIKLPTLRDMFA* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01503 176 FunFam Desiccation protectant protein Lea14-like 41 175 - -
Lapu1g01503 176 PANTHER - 26 170 IPR045043 -
Lapu1g01503 176 Gene3D - 41 175 - -
Lapu1g01503 176 Pfam Late embryogenesis abundant protein 68 164 IPR004864 -
Lapu1g01503 176 SMART why 48 165 IPR013990 GO:0009269
Lapu1g01503 176 SUPERFAMILY LEA14-like 25 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01503 Lapu-Chr1 27807944 27809455 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01503 - - gmx:547837 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01503 1 27807944 27809455 Lapu1g01503 1 27807944 27809455 ECH
Lapu1g01503 1 27807944 27809455 Lapu10g00171 10 3557651 3558739 PCT