Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00171 ATGTCGCAGTTACTGGATAAAGCGAAGAACTTCGTGTCGGAGAAGATAAACGAAATGGCGAAGCCTGAGGCGAGTTTGAGCGACGTGGACTTCAAGCGCGTGAGCAAAGATAGTATGGAGTACTTGGCCAAGGTCGCTGTTCGTAACCCGTATTCAACTCCGATACCCATCTGCGAGATCCACTACTCTTTCAAAAGCGCGTCCAGGGAGATAGCATCAGGGACAATTCCAGACCCAGGATCCTTGAAGGCGAAGGACACGACCATGGTGGATGTTCCAGTTAAGGTTCCATACAGCATACTAATGTCCTTAGCAAGGGACATTGGTACTGACTGGGACATAGACTATCAACTGGATCTTCGTCTCGTTATTGATCTTCCTGTCATTGGCAACTTCACCATTCCTCTCTCTCACAAGGGAGAGATCAAGCTTCCAACCCTCTCCACCATGTTCGCTTAG 459 0.488 MSQLLDKAKNFVSEKINEMAKPEASLSDVDFKRVSKDSMEYLAKVAVRNPYSTPIPICEIHYSFKSASREIASGTIPDPGSLKAKDTTMVDVPVKVPYSILMSLARDIGTDWDIDYQLDLRLVIDLPVIGNFTIPLSHKGEIKLPTLSTMFA* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00171 152 PANTHER - 3 146 IPR045043 -
Lapu10g00171 152 SMART why 24 141 IPR013990 GO:0009269
Lapu10g00171 152 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Lapu10g00171 152 SUPERFAMILY LEA14-like 1 150 - -
Lapu10g00171 152 Gene3D - 17 151 - -
Lapu10g00171 152 FunFam Desiccation protectant protein Lea14-like 17 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00171 Lapu-Chr10 3557651 3558739 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00171 - - gmx:547533 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00171 10 3557651 3558739 Lapu10g00171 10 3557651 3558739 ECH
Lapu1g01503 1 27807944 27809455 Lapu10g00171 10 3557651 3558739 PCT