Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01398 ATGGCAACCATGAACCCATTTGATTTGTTGGGGGATGACGCAGAGGACCCTTCTCAGCTCATCGTCGCCGAGCAACTCAAGGCGGCTGCGGCGGCGACGACGGCTCCCAAGAAGGCGCCGGTTCAGCAGAACAAGCCTGCTCAGCTGCCCACCAAGCCTCCTCCTCCTGCTCAAGCCGTGAGGGAGTCCAGAAATGAGCCTGTTCGTGGAGGACGTGGAGGTGGACGAGGTGGTGGACGTGGGTTTGGACGTGGCCGTGGATTTAGTCGTGACTCTTCCAATGACGAGAACTCATTTCCTGCCACTGGAGCTCCTTACAATCAGGGCTCCTTTGAAGAAGGAGATGCTGGGAAGTCTTCTGAAAGACGTGGTTATGGTGGACCACGAGGTCCTTACCATGGTGGTCGTCGTGGAGGTTTCAGCAATGGTGAAACTGGTGAAGGCGATGAAGGACGCCCTCGAAGAGCATTTGAGCGTCGCAGTGGGACGGGTCGAGGAAATGAATTTAAACGCGAAGGTGCTGGACGTGGTAACTGGGGAACACAAAATGATGAAATTACTCAGGCAACTGATGAAGTCGTGAATGAAACTGAAAAGAATTTGGGAGATGAGAAGCCTGCAGTTGAAGAAGTAGCTGACGGAAACAAGGACAGTCTTGCTAATGAAACTGAAGAGAAAGAGCCTGAAGATAAGGAGATGACTCTGGAGGAATATGAGAAAGTGCTGGAAGAGAGAAGGAAGGCCTTCCAAGCACTCAAGACTGAAGGGAGAAAGGTAGACACTAAAGAGTTTGAAGCCATGCAACCCTTATCAAGCAAAAAGGACAATCATGACATATTCATTAAACTGGGATCTGATAAAGATAAGAGAAAAGAGGCTTTTGAGAAGGAAGAAAAATCCAAGAAGTCTGTTAGCATCACCGAATTTCTGAAGCCAGCTGAAGGAGAAACTTACTACAGTCCAGGTGGGCGCGGTAGGGGTCGTGGTCGTGGCACCCGTGGTGGTTATCGCGGAGGTGCCACCAACAGTGCACCTGCTCCATCCATTGAAGATCCTGGGCATTTCCCAACCTTGGGTGCCAAGTGA 1086 0.5101 MATMNPFDLLGDDAEDPSQLIVAEQLKAAAAATTAPKKAPVQQNKPAQLPTKPPPPAQAVRESRNEPVRGGRGGGRGGGRGFGRGRGFSRDSSNDENSFPATGAPYNQGSFEEGDAGKSSERRGYGGPRGPYHGGRRGGFSNGETGEGDEGRPRRAFERRSGTGRGNEFKREGAGRGNWGTQNDEITQATDEVVNETEKNLGDEKPAVEEVADGNKDSLANETEEKEPEDKEMTLEEYEKVLEERRKAFQALKTEGRKVDTKEFEAMQPLSSKKDNHDIFIKLGSDKDKRKEAFEKEEKSKKSVSITEFLKPAEGETYYSPGGRGRGRGRGTRGGYRGGATNSAPAPSIEDPGHFPTLGAK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01398 361 Gene3D - 151 263 - -
Lapu1g01398 361 MobiDBLite consensus disorder prediction 285 361 - -
Lapu1g01398 361 Pfam Hyaluronan / mRNA binding family 153 259 IPR006861 -
Lapu1g01398 361 MobiDBLite consensus disorder prediction 180 195 - -
Lapu1g01398 361 Pfam Stm1 1 74 IPR019084 -
Lapu1g01398 361 MobiDBLite consensus disorder prediction 196 234 - -
Lapu1g01398 361 MobiDBLite consensus disorder prediction 147 172 - -
Lapu1g01398 361 MobiDBLite consensus disorder prediction 285 305 - -
Lapu1g01398 361 SMART HABP4_PAI_RBP1_2 153 260 IPR006861 -
Lapu1g01398 361 MobiDBLite consensus disorder prediction 28 234 - -
Lapu1g01398 361 Coils Coil 235 255 - -
Lapu1g01398 361 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 359 IPR039764 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01398 Lapu-Chr1 26852069 26858296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01398 K13199 - gmx:100814825 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01398 1 26852069 26858296 Lapu1g01398 1 26852069 26858296 ECH
Lapu10g00810 10 9891964 9896861 Lapu1g01398 1 26852069 26858296 PCT