Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00810 ATGGCCACTGCCAATCCATTTGATTTGTTGGGCGACGATGCCGAAGACCCGTCGCAGTTGATCGCGGCCGAGCAGTTGAAGGCCGCCGCTGCTCCGAAGAAGGAGCAGGGCAAGCCTGGAGCCCGCAGTGGTGCGGCGGTGAGTCAGCAGAGCAAGGCGGCTCAGTTGCCTACCAAGCCGCTTCCCCCCTCTCAGGCTGTGAGGGAGGCAAAAAATGACACTTCTTATGGGAGCCGTGGAGGTGGCCGAGGAGGTGGAAGAGGATATGGACGAGGACGTGGTGGTGGCAGTGGCTTTGGTCGTGATTTCTCCCATGACGAGAACTCATCTGCCCCAGCTAACCAAGGGTCTTTCGAAGGAGATGCTTCGAATCCCTCAGAAAGACGTGGTTATGGTGCACCACGTGGGCCCTATCGTGGTGGTGGTCGTGGTCGTGGTGGTCATGGAGGTTTTAGCAATGGTGAAGTTGGTGAGGATGGACGCCCAAGAAGAGCTTTCGAACGCCACAGTGGGACTGGGCGAGGAAATGAATTCAAACGGGATGGTGCTGGACGAGGAAACTGGGGTACACAGTCTGATGAAATTGCTCAGGTGACTGAGGACGTTGTGGATGAGACTGAAAAGAATTTGGGTGATGAGAAGCCTGTAGGTGAGGAAGATGCAGCAGATGGAAACAAGGATAGTCCTGCTAATGAAAATGAAGAGAAGGAGCCTGAGGACAAGGAGATGACTCTGGAAGAGTATGAGAAAGTGCTGGAAGAGAGAAGGAAGGCCCTGCAGGCACTCAAGACTGAAACAAGAAAGGTGGATATCAAGGAGTTTGCATCCATGCAACCACTGTCAAACAAGAAAGACAATGATGAGATATTTATTAAATTGGGATCTGACAAGGACAAGCGTAAAGATGCTTTGGAGAAGGAGGAGAGATCCAAGAAGTCTGTGAACATCAACGAGTTTCTGAAGCCAGCTGAAGGGGAAAGGTACTACAACACAAGTGGGCGTGGGAGGGGACGTGGTCGTGGTCCTCGAGGAGGATACAGTGGAAATGCCGGGAGCAATGTCTCAGCTCCTTCTATTGAGGATCCTGGGCAATTCCCAACCTTGGGTGGCAAGTGA 1116 0.5278 MATANPFDLLGDDAEDPSQLIAAEQLKAAAAPKKEQGKPGARSGAAVSQQSKAAQLPTKPLPPSQAVREAKNDTSYGSRGGGRGGGRGYGRGRGGGSGFGRDFSHDENSSAPANQGSFEGDASNPSERRGYGAPRGPYRGGGRGRGGHGGFSNGEVGEDGRPRRAFERHSGTGRGNEFKRDGAGRGNWGTQSDEIAQVTEDVVDETEKNLGDEKPVGEEDAADGNKDSPANENEEKEPEDKEMTLEEYEKVLEERRKALQALKTETRKVDIKEFASMQPLSNKKDNDEIFIKLGSDKDKRKDALEKEERSKKSVNINEFLKPAEGERYYNTSGRGRGRGRGPRGGYSGNAGSNVSAPSIEDPGQFPTLGGK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00810 371 MobiDBLite consensus disorder prediction 43 58 - -
Lapu10g00810 371 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 370 IPR039764 GO:0003723
Lapu10g00810 371 Pfam Stm1 1 81 IPR019084 -
Lapu10g00810 371 MobiDBLite consensus disorder prediction 261 371 - -
Lapu10g00810 371 MobiDBLite consensus disorder prediction 1 245 - -
Lapu10g00810 371 MobiDBLite consensus disorder prediction 201 245 - -
Lapu10g00810 371 SMART HABP4_PAI_RBP1_2 162 270 IPR006861 -
Lapu10g00810 371 Gene3D - 160 273 - -
Lapu10g00810 371 Coils Coil 245 268 - -
Lapu10g00810 371 MobiDBLite consensus disorder prediction 157 181 - -
Lapu10g00810 371 MobiDBLite consensus disorder prediction 103 122 - -
Lapu10g00810 371 Pfam Hyaluronan / mRNA binding family 162 269 IPR006861 -
Lapu10g00810 371 MobiDBLite consensus disorder prediction 285 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00810 Lapu-Chr10 9891964 9896861 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00810 K13199 - gmx:100791259 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00810 10 9891964 9896861 Lapu10g00810 10 9891964 9896861 ECH
Lapu10g00810 10 9891964 9896861 Lapu1g01398 1 26852069 26858296 PCT