Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00648 ATGCAGAGGGCACCACTTGCACATTCCCATGAGTTTGCCTTGAAGGAGACCTCTCCCAACATTGGGGCAGGGGCAGTCACAAGGGACAAGCTATCATGCACCTATGACCTTGTTGAACAGATGCAATACCTCTATGTTCGCGTGGTCAAAGCCAGGGACTTACCTGCAAAAGATGTCACCGGAAGTCTTGATCCCTATGTTGAAGTGAAGCTTGGAAACTTCAAGGGACTCACCAAGCATTTTGAGAAGAAGTCCAACCCTGAGTGGAATCAGGTCTTTGCCTTCTCCAAAGAACGGATTCAAGCGTCAGTGTTGGAGGTTATTGTCAAAGATAAGGATGTTATTTCAGATGACTTTGTGGGGAGGGTGTGGTTTGATCTGAATGAGATCCCAATACGTGTTCCCCCAGACAGTCCTTTGGCTCCACAGTGGTACAGACTGGAAGATCGCAAGGGTATAAAGGCCAAAGGAGAGTTAATGCTTGCAGTTTGGATGGGGACTCAAGCAGATGAGGCATTTCCAGATTCTTGGCACTCTGATGCAGCAATGGTTGGCTCTGAAGCAGTTGCAAACATAAGGTCAAAAGTTTACCTCTCTCCCAAGCTCTGGTATGTCAGGGTCAATGTGATTGAAGCGCAGGACTTGATTCCAAGTGACAAGAGCCGGTATCCTGAAGTTTTTGTGAAGGTTAATCTAGGGAGCCAGTTTTCGAGAACTAGAGTGTCTCAAAGTAAAACCATAAATCCTATGTGGAATGAGGATTTGATGTTGGTTGCTGCGGAGCCGTTTGAGGAGCCCTTGATTCTGACCGTGGAAGACAGGCTTGGACCAAACAAAGATGAGATACTGGGAAGGTGTGTGATCCCTTTGCAGATTGTGCAACGGAGGCTGGACCATAAGCCTGTGAACACCAGGTGGTTTAATCTTGAGAAGCATGTGCTTGTTGAAGGGGAGAAGGAGACCAAATTCGCAAGCAAGATACATTTAAGGGTGTGCTTGGATGGTGGGTTCCATGTGTTGGATGAGTCAACTCATTACAGTAGTGATCTTAGACCAACTGCTAAGCAGCTATGGAAGCCTAGCATTGGAATTCTAGAAGTGGGGATTATAAGTGCACTAGGGCTTATGCCAATGAAGACAAGAGATGGTAGAGGAACCACAGATGCTTACTGTGTGGCAAAATATGGGCAGAAGTGGATCCGCACTAGGACTATTGTAGATAGCTTCACTCCAAAGTGGAATGAGCAGTACACTTGGGAAGTGTTTGATCCTTGCACTGTTATTACCATAGGGGTCTTTGACAATGGTCGTGTACAAGGAGGAGGAGATAAAGCTAGTGAATCAAAGGATTCTAAGATAGGGAAGGTGAGAATTAGGCTATCCACACTTGAAGCTGATAGAGTTTATACACATTCATATCCTCTTTTAGTACTTCATACTTCAGGTTTGAAGAAAACAGGAGAAGTGCAATTGGCTGTGAGGTTCACAAACTCATCTTTCATCAATATGTTGTACATGTATTCCCAGCCTTTGTTGCCAAAGATGCACTACACCCATCCTTTGTCTGTGATTCAGCTGGACAGTCTGAGGCATCAGGCCATGCAGATTGTATCAATGAGGTTGAGCAGAGCTGAGCCACCTCTAAGGAAAGAGGTTGTAGAATACATGCTTGATGTGGATTCGCATATGTGGAGTATGAGAAGGAGCAAAGCTAATTTCTTCAGGATAATGAAAGTTCTAGGTGGTTTGATCGCCTTCGGGAGGTGGTTTGATCAGATATGCAATTGGAAGAATCCCATCACCACCATTCTAATTCATGTCCTTTTCTTAATATTGGCTCTTTACCCTGAGCTAATACTTCCCACAATCTTCTTGTACCTGTTCTTGATTGGAATCTGGAACTTCAGATGGAGGCCTAGACACCCTCCACACATGGACACTAGACTGTCTCATGCCGATGCTGCTCACCCTGATGAATTGGATGAAGAGTTTGATTCATTCCCAACTTCACGGTCACCGGATATCGTTAGGATGAGATATGATCGTTTAAGAAGCATTGCAGGGAGAGTCCAGAGTGTTGTAGGAGACTTAGGTACACAAGGAGAAAGGTTCCAAAGTCTGCTAAGCTGGAGAGATCCAAGGGCTACTACACTCTTCGTGACATTCTGTTTCATTGCTGCTATAGTTCTCTATGTTACTCCCTTTCAAGTTGTGTCACTTCTCATTGGCTTCTACATGCTAAGGCACCCCAGATTCCGCAGGAGACTTCCATCAGTACCACTCAACTTCTTCAGGAGGTTGCCTGCTAGATCAGACAGCATGTTGTAA 2328 0.4519 MQRAPLAHSHEFALKETSPNIGAGAVTRDKLSCTYDLVEQMQYLYVRVVKARDLPAKDVTGSLDPYVEVKLGNFKGLTKHFEKKSNPEWNQVFAFSKERIQASVLEVIVKDKDVISDDFVGRVWFDLNEIPIRVPPDSPLAPQWYRLEDRKGIKAKGELMLAVWMGTQADEAFPDSWHSDAAMVGSEAVANIRSKVYLSPKLWYVRVNVIEAQDLIPSDKSRYPEVFVKVNLGSQFSRTRVSQSKTINPMWNEDLMLVAAEPFEEPLILTVEDRLGPNKDEILGRCVIPLQIVQRRLDHKPVNTRWFNLEKHVLVEGEKETKFASKIHLRVCLDGGFHVLDESTHYSSDLRPTAKQLWKPSIGILEVGIISALGLMPMKTRDGRGTTDAYCVAKYGQKWIRTRTIVDSFTPKWNEQYTWEVFDPCTVITIGVFDNGRVQGGGDKASESKDSKIGKVRIRLSTLEADRVYTHSYPLLVLHTSGLKKTGEVQLAVRFTNSSFINMLYMYSQPLLPKMHYTHPLSVIQLDSLRHQAMQIVSMRLSRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMKVLGGLIAFGRWFDQICNWKNPITTILIHVLFLILALYPELILPTIFLYLFLIGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDSFPTSRSPDIVRMRYDRLRSIAGRVQSVVGDLGTQGERFQSLLSWRDPRATTLFVTFCFIAAIVLYVTPFQVVSLLIGFYMLRHPRFRRRLPSVPLNFFRRLPARSDSML* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00648 775 Gene3D C2 domain 361 499 IPR035892 -
Lapu11g00648 775 FunFam C2 domain-containing protein 346 499 - -
Lapu11g00648 775 Gene3D C2 domain 42 164 IPR035892 -
Lapu11g00648 775 FunFam C2 domain-containing protein 38 182 - -
Lapu11g00648 775 Gene3D C2 domain 188 333 IPR035892 -
Lapu11g00648 775 ProSiteProfiles C2 domain profile. 346 473 IPR000008 -
Lapu11g00648 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 43 181 IPR035892 -
Lapu11g00648 775 ProSiteProfiles C2 domain profile. 25 145 IPR000008 -
Lapu11g00648 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 363 508 IPR035892 -
Lapu11g00648 775 ProSiteProfiles C2 domain profile. 183 307 IPR000008 -
Lapu11g00648 775 CDD C2D_MCTP_PRT_plant 364 492 IPR047255 -
Lapu11g00648 775 CDD C2C_MCTP_PRT_plant 204 352 IPR047258 -
Lapu11g00648 775 FunFam C2 domain-containing protein 190 333 - -
Lapu11g00648 775 Pfam C2 domain 203 309 IPR000008 -
Lapu11g00648 775 Pfam C2 domain 43 145 IPR000008 -
Lapu11g00648 775 Pfam C2 domain 363 475 IPR000008 -
Lapu11g00648 775 CDD C2B_MCTP_PRT_plant 43 167 IPR047257 -
Lapu11g00648 775 SMART C2_3c 204 302 IPR000008 -
Lapu11g00648 775 SMART C2_3c 364 472 IPR000008 -
Lapu11g00648 775 SMART C2_3c 43 139 IPR000008 -
Lapu11g00648 775 Pfam Plant phosphoribosyltransferase C-terminal 620 775 IPR013583 -
Lapu11g00648 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 203 354 IPR035892 -
Lapu11g00648 775 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 9 775 IPR047259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00648 Lapu-Chr11 9656178 9658867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00648 1 775 Lipid Metabolism Gene Families AT3G57880 80.438 0.0 1334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00648 - - gmx:100788273 1479.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00315 5 2610557 2612889 Lapu11g00648 11 9656178 9658867 PCT