Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00583 ATGGTCTTGCAGAAGAGGTTAGAGTACGGATTTAATGGCTATCAGGCTCCTGCCATGCCCCGAGCTTCTCGCTCAGTTAGGAGGAGGGCTAAATTTCAAAGAGCAGAAGACAAGCAAAAGTGCGCATTTGACTTATTGGCCACCGTAGCTGGTAAACTATTGCAAGAGAGAGATAATCCAGCCATTTATAGGGATACAAAGTCAGATAAGGATCAGTGTGGATTTGTCAAAGAGTGCCATGATGCAACTAAACCATCCAAATCTGAGATTTCTGACGAAAGAAATTGTGACAAAAAAAGTTTGAAAGAATTCCCACATCTTGCAATCGATGACCATGCAAAGATTGCTTCTATAGTAACAAGTTCTAGTTGCTTAGAGAGGTTTATTGCAAAAAACCTGGTGGATGGCAATAGCCATATCGAAATGGAAAATGTTACTAGCGAAGTCAAATTAGATTCTTCTGGTTATCGAAAGGATAGTCATTTCAAGATAGATGGCGATACAAGTAAAGGAAAGGATGGGGTGCATGGGTTGGAGAAGGTGCCAATTGGCAGTGGGATTGAGATGTACAGTTTTGGGGATCCGCTGGATGAAAATCCTCCTGCGTTGATCACTTTAGGTGACAGTGCCAAATTGTCTGGGTATAATGATAGGATTCCCGTTAGCTTGTTGTCCAAAGGTTGTGACAAAGTACCAGTAGTTAGTAGAGATGATGACGAAAACTCTTCTGGGTGTACTCACCCTATTAATACTAAAACCAAGACCCCGAAGAATTGTATAGGTGATGATAGAATAAGTAAAAAAATGGCTTCTAACTTTCGGAAAGTTGCTCAAAAGCCGAGGCCTGATACACTTTCTAACAGTGGTGGAAACGTGCTAATTTTAGATGGAGTTTGGAAGCAAACTTACCACACTAAGAGGAAGTGCAATAAACGCCAAATTTCTCAGATGAATATTCCTTTTAAAAAGAGGAAGATTTTTAAATATAAGCCTGTTTCAAACTCTAATGGATTTACCAGGAGTGGTGGAATTTATTATTCATCCGAGAATTGTATGAATCAGGATGCTTGCGGTTCACTTCCTGGGATGCACACAGACCCTGGCATACCATCCTTGGAAGCATGTCAACACCAGGCGTTACGACGACGTATAGGTTCTCAGGTGAAGCTTAGGATCAAGTCATTTAGAGTGCCAGAGCTTTTTATAGAGGTTCCAGAAACTGCAACAATTGGGTCCTTGAAGAGGACAGTGATGGATGCAGTGACCACTGTACTCAGGGGTGAATTGCACATTGGTGTTTTTCTCCGGGGAAAGAAAGTTAGGGATGACAGTAAAACACTACTTCAAACTGGAATTTCTCATCATAACCAGCTTGATGCTTTGGGTTTCACCCTGGAGCCTAATTCTTCACAAAGCCTACCGATTGTACGTGCTGCACACTCTCCCCGTCCCAGCACTGTCGTAACTCCGCCTGTAATAAGTCCAGCTGTAATTCATCAGAGCGTTCAAGGCAATTCTGACATGTTACCCGAGCATCAAGTAACCGGTTTTGGTAGCCTATTTGAAAGTGACCATGATTCGACGCCTTCTCTTGCTAACATTTCTATTGACAAAATTATGGAAGATTCCAAAGAATTGGTTACTGTTCTTGAAAAGGGTAAGAAGGAACTAGCTATGGTATCTGTACTCGAGAAGCCAAGGCGATCCGAGGTGGTACAGCGCCGAATACGTAGGCCTTTTTCTGTAGATGAAGTAGAAGCATTGGTTCAAGCAGTTGAAAAACTAGGAACCGGAAGGTGGCGTGATGTTAAGCTTTGTGCTTTCGATAATGCAAAACATCGAACATATGTGGATTTGAAGGATAAATGGAAAACACTAGTGCACACGGCAAGAATATCCCCTCAGCAAAGGAGGGGTGAACCTGTTCCCCAAGAACTTTTGGACAGGGTTCTAGTGGCCCACGCATATTGGTCCCATCAGCAGTCTAAGCAACAGCACAAGCAACATCCAGAAACTGAAACTATCTTCTCCTTCAATCATAATGGCCACGGGTTGTCAGCAGCAAGTGGCCATGTGGATGAGAGTGTTTTGGTTTCTGACTTTTGTTATTAG 2112 0.4266 MVLQKRLEYGFNGYQAPAMPRASRSVRRRAKFQRAEDKQKCAFDLLATVAGKLLQERDNPAIYRDTKSDKDQCGFVKECHDATKPSKSEISDERNCDKKSLKEFPHLAIDDHAKIASIVTSSSCLERFIAKNLVDGNSHIEMENVTSEVKLDSSGYRKDSHFKIDGDTSKGKDGVHGLEKVPIGSGIEMYSFGDPLDENPPALITLGDSAKLSGYNDRIPVSLLSKGCDKVPVVSRDDDENSSGCTHPINTKTKTPKNCIGDDRISKKMASNFRKVAQKPRPDTLSNSGGNVLILDGVWKQTYHTKRKCNKRQISQMNIPFKKRKIFKYKPVSNSNGFTRSGGIYYSSENCMNQDACGSLPGMHTDPGIPSLEACQHQALRRRIGSQVKLRIKSFRVPELFIEVPETATIGSLKRTVMDAVTTVLRGELHIGVFLRGKKVRDDSKTLLQTGISHHNQLDALGFTLEPNSSQSLPIVRAAHSPRPSTVVTPPVISPAVIHQSVQGNSDMLPEHQVTGFGSLFESDHDSTPSLANISIDKIMEDSKELVTVLEKGKKELAMVSVLEKPRRSEVVQRRIRRPFSVDEVEALVQAVEKLGTGRWRDVKLCAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLVAHAYWSHQQSKQQHKQHPETETIFSFNHNGHGLSAASGHVDESVLVSDFCY* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00583 703 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 669 IPR031105 -
Lapu11g00583 703 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 573 631 IPR017930 -
Lapu11g00583 703 CDD SANT_TRF 578 628 - -
Lapu11g00583 703 SMART sant 576 629 IPR001005 -
Lapu11g00583 703 Gene3D - 566 669 - -
Lapu11g00583 703 SUPERFAMILY Homeodomain-like 578 658 IPR009057 -
Lapu11g00583 703 ProSiteProfiles Myb-like domain profile. 572 627 IPR001005 -
Lapu11g00583 703 SUPERFAMILY Ubiquitin-like 386 471 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00583 Lapu-Chr11 9127649 9133167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00583 - - vun:114169292 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00366 5 3039151 3044979 Lapu11g00583 11 9127649 9133167 PCT