Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00531 ATGGAGTTCCTCTATCTACTCTACCTCGTTCCAACGTTGTACTCGTGTTTTCTCATCTGGAAAATGTTGGAGGAGAGACGTGACAGGGAGTGTTACATCCTGGACTATCAATGCTACAAGCCCCCTAACGACCGAATGCTGGGCACTGAGTTTTGTGGCAAACTCATCAAACGCACTGAAAACTTGGGTCCCAGCGAGTACCGGTTTCTGCTGAAGGCCATCGTCAGCTCCGGCATCGGTGAACAAACTTACGCGCCAAGAAATATCTTCGAGGGTCGCGAGGGAACGCCCACATTGCTCGACGGCATCGGAGAGATGGAAGAGTTCTTCAACGACGCCATCGCCAAGCTACTCGCCAAATCAAAAGTCTCCCCCTCTGAGATCGACGTTCTCGTGGTCAACATCTCCATGCTCGCCGCCGTCCCCTCCCTCTCCTCGCGCATCATCAACCGCTACAAGCTCCGCCACGATGTCAAGGTCTACAATCTCACCGGCATGGGTTGCAGCGCCAGCCTCATCTCCATGGACATTGTCAAAAACATCTTCAAGACGCAGAGGAACAAGCTGGCGTTGTTGATCACCTCCGAGTCCCTCAGCCCCAACTGGTACACTGGCAACGACAGATCCATGATCCTCGCCAACTGTTTGTTCCGCTCCGGCGGCTGCGCGATTCTCTTGACTAACAAACGGTCCATGAAGGACAGAGCCATGCTGCGGTTGAAGTGCCTGGTGAGGACGCATCACGGTGCCAGAGAAGAGGCTTATGGATGTTGTATTCAGCGGGAAGACGACCAGGGAAGGTTAGGGTTTCACCTTGGGAAGACGCTTCCGAAGGCCGCCACCCGAGCCTTCGTTGATAATCTTCGAGTCATAGCACCAAAGATATTACCTATCCGTGAGTTGCTCAGGTTTTTGTTCATGTCCCTTGTTAAAAAAGTGAACAAAAACAACACTCCTAAGTCTGCAAGCACTGGAGCTACTAAATCTCCGTTGAACTTCAGAACAGGGGTGGATCATTTTTGCTTGCACACCGGAGGAAAAGCTGTGATCGACGGCATTGGAATGAGCTTGGATCTGAGCGAGTACGACCTGGAACCGGCGAGGATGACGCTGCACCGGTTCGGGAACACGTCAGCGAGTAGCTTGTGGTACGTGTTATCGTACATGGAAGCGAAGAAGAGGTTGAAGAAGGGTGACACGGTGTTCATGATAAGTTTTGGTGCAGGCTTTAAATGTAACAGCTGTTTGTGGGAGGTGATGAAGGACTTGGGAGACCCAAATGTGTGGGACGATTGCATTGATGACTATCCACCGGAGTCATTAGACAACCCCTTCATGAAGACTTATGGTTGGATCAACGATGTTGAGGACCCCTACACTTACGAAAAAATGCCCGATTTTCTCAAGTGA 1410 0.5128 MEFLYLLYLVPTLYSCFLIWKMLEERRDRECYILDYQCYKPPNDRMLGTEFCGKLIKRTENLGPSEYRFLLKAIVSSGIGEQTYAPRNIFEGREGTPTLLDGIGEMEEFFNDAIAKLLAKSKVSPSEIDVLVVNISMLAAVPSLSSRIINRYKLRHDVKVYNLTGMGCSASLISMDIVKNIFKTQRNKLALLITSESLSPNWYTGNDRSMILANCLFRSGGCAILLTNKRSMKDRAMLRLKCLVRTHHGAREEAYGCCIQREDDQGRLGFHLGKTLPKAATRAFVDNLRVIAPKILPIRELLRFLFMSLVKKVNKNNTPKSASTGATKSPLNFRTGVDHFCLHTGGKAVIDGIGMSLDLSEYDLEPARMTLHRFGNTSASSLWYVLSYMEAKKRLKKGDTVFMISFGAGFKCNSCLWEVMKDLGDPNVWDDCIDDYPPESLDNPFMKTYGWINDVEDPYTYEKMPDFLK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00531 469 PIRSF Very_long_ch_3-ktacl-CoA_syn 2 451 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lapu11g00531 469 Gene3D - 81 419 IPR016039 GO:0016746
Lapu11g00531 469 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lapu11g00531 469 CDD CHS_like 19 417 - -
Lapu11g00531 469 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 337 418 IPR013747 -
Lapu11g00531 469 SUPERFAMILY Thiolase-like 26 420 IPR016039 GO:0016746
Lapu11g00531 469 PANTHER 3-KETOACYL-COA SYNTHASE 17 438 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00531 Lapu-Chr11 8712937 8714829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00531 19 466 Acyl Lipid Metabolism Gene Families AT2G28630 69.365 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00531 K15397 - gmx:100810048 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00419 5 3469859 3471953 Lapu11g00531 11 8712937 8714829 PCT