Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00450 ATGTACAAGAACCAGCTTCAGGAGCTGGCACAGCGAAGCTGCTTCAACCTGCCTTCCTACACGTGCATTCGGGAAGGTCCCGATCACGCGCCGCGCTTCAAGGCCACCGTCAACTTTAACGGCGAGATCTTTGAGAGCCCTCAATACTGCTCTACGCTCCGTCAGGCGGAGCACTCCGCCGCCGAGGTCGCGCTCAATTCGCTCTCCAACCGTGCTCCATCTCACTCCCTCGCCGCCAGGATCCTCGATGAAACGGGAGTGTACAAGAACCTCCTGCAGGAAATTGCACAGAGGGTAGGGGCGCCATTGCCACAGTACTTTACGTTCAGGTCAGGCCTAGGGCATCTTCCTGTATTTACTGGGACAGTGGAGTTAGCTGGAATCATGTTTACTGGTGAGCCTGCTAAGAATAAGAAACAAGCGGAGAAAAATGCAGCTATGGCGGCTTGGTCTTCTCTAAAGCAATTGGCGAAAGAAACTGCAAGGTCTTCAACTGAACCTGAGAACAACGACGAACTAGAACAGATCACTATAGCACGGGCTTTGCGGAACTACCGACTGAAGGAAAAAATTTCAATGGCAAATCCGAATGCGCCAATTCCATTTCCAAAGAAGTTTCAGATTCAAAATCCCAGGCCAACCAGTCCTCAGCCTCCTCCTGCTGCTACATCAAAGATTCTTCCTTTAATATGCCAAAAGTCAGCTTCTCGAAGCAGGCATCCTGTCACAGCATCTCCAGCACTAGCAGCCAGTGACAATTCTGCGATGCCGCAACTTTCTGCCACACCAGATGGCCGAAGAATCCGTCGCCCTAAGTTCCCTGCTGCTGGAGCAGCGCCTTATGTTCCCATCAGACAAATGAGACCGCCTTGCCAGGGAATGGCACCTCCAGTGACTATAAGGACTGCAGTACCTGTATTCTCTCCGCCACCGCCTACAGCAGCTGCAGTGTCCCTTCCAGTACTACGAGCTCCTCCAGTACGAGTTGCTCCTCCTGTCACTATTAGGCAAGCTGTTCCAGTATTTGCTGCTCCGCCTGTTCGAATAGACGAACCTGTTCCCAGCCTTACCAGCCCAGAACCTGTTCCTACCCCAAAAGACGATGCTCCAATGATTAGTTCCCCTTGCCTGGAAGACAAACTACCAGCTAAAACTCCAGAGACAGAGATCAAGACTGAGAAAATTCCAGCAGAATCTGAAACAGTGCAGAGGTTGGTGGAGCTGAAAATTTGA 1233 0.515 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSAAEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFTGTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIARALRNYRLKEKISMANPNAPIPFPKKFQIQNPRPTSPQPPPAATSKILPLICQKSASRSRHPVTASPALAASDNSAMPQLSATPDGRRIRRPKFPAAGAAPYVPIRQMRPPCQGMAPPVTIRTAVPVFSPPPPTAAAVSLPVLRAPPVRVAPPVTIRQAVPVFAAPPVRIDEPVPSLTSPEPVPTPKDDAPMISSPCLEDKLPAKTPETEIKTEKIPAESETVQRLVELKI* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00450 410 MobiDBLite consensus disorder prediction 196 280 - -
Lapu11g00450 410 CDD DSRM_AtDRB-like_rpt1 1 69 IPR044450 GO:0003725
Lapu11g00450 410 PANTHER - 1 346 - -
Lapu11g00450 410 SUPERFAMILY dsRNA-binding domain-like 2 68 - -
Lapu11g00450 410 Pfam Double-stranded RNA binding motif 2 68 IPR014720 -
Lapu11g00450 410 Pfam Double-stranded RNA binding motif 88 153 IPR014720 -
Lapu11g00450 410 Gene3D - 2 83 - -
Lapu11g00450 410 SMART DRBM_3 88 154 IPR014720 -
Lapu11g00450 410 SMART DRBM_3 2 69 IPR014720 -
Lapu11g00450 410 Gene3D - 84 155 - -
Lapu11g00450 410 MobiDBLite consensus disorder prediction 352 390 - -
Lapu11g00450 410 CDD DSRM_AtDRB-like_rpt2 86 154 IPR044451 GO:0003725
Lapu11g00450 410 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1 70 IPR014720 -
Lapu11g00450 410 FunFam Double-stranded RNA-binding protein 2 1 70 - -
Lapu11g00450 410 MobiDBLite consensus disorder prediction 236 260 - -
Lapu11g00450 410 FunFam Double-stranded RNA-binding protein 2 84 155 - -
Lapu11g00450 410 SUPERFAMILY dsRNA-binding domain-like 88 159 - -
Lapu11g00450 410 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 87 155 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00450 Lapu-Chr11 7836559 7840613 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00450 - - gmx:100816445 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00466 5 4011570 4014441 Lapu11g00450 11 7836559 7840613 PCT