Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00413 ATGCCATCATCACTATCCTCTTTCTTCCAAATGGTTCCTATTCTCCCCCTTCTTGTACTCTCATGTATGATTTATTCTGGTTGTGCACAGGGACCACCTTCACCTGGCTACTACCCCAGTTCCAAAATTAGTCCTATTAGCTTTAATCAAGGGTTTAAAAACCTTTGGGGACCTCAGCATCAGAGAATAGACCAGGGCTCATTGACAATATGGCTAGACACTAGCTCAGGGAGTGGATTCAAGTCACTTCACTCTTATAAATCTGGATACTTTGGCGCTGCAATTAAGCTTCAACCTGGTTACACTGCAGGAGTCATCACATCTCTCTACCTTTCAAACAACCAAGACCACCCCGGAAACCATGATGAAATTGACATAGAGTTCCTTGGTACCACGCCAGATAAGCCATATGTGTTGCAGACAAATGTATACATCAGAGGAAGTGGAGATGGGAATATTATAGGAAGAGAGATGAGGTTTCATCTCTGGTTTGACCCAACACAGGATTTTCACAACTATGCCATTCTATGGAAACCCGCTGAGTTAATATTTTTTGTGGATGATGTCCCAATAAGAAGGTATCCAAGGAAAAGTGAGGCCACATACCCTTCAAGGCCAATGTATGTGTATGGTTCAATATGGGATGCATCTTCTTGGGCAACAGAGGGTGGAAAATACAAAGCTGATTATAAGTACCAACCCTTCATTGGTAGGTATAAAAACTTCAGAATTCAAGGTTGCACTAGTGAAAGCTCTGCCTCGTGCCAGCCACCTTCTGCCTCTCCATCTGGGTTTGGAAGTCTTAGCCCTCAGCAGTTTAGGGCCATGCAATGGGTCCAAAACAGTTACATGGTGTACAACTATTGCCATGACCCTAGGAGAGACCACAACCTCATCCCAGAATGCTAA 909 0.4378 MPSSLSSFFQMVPILPLLVLSCMIYSGCAQGPPSPGYYPSSKISPISFNQGFKNLWGPQHQRIDQGSLTIWLDTSSGSGFKSLHSYKSGYFGAAIKLQPGYTAGVITSLYLSNNQDHPGNHDEIDIEFLGTTPDKPYVLQTNVYIRGSGDGNIIGREMRFHLWFDPTQDFHNYAILWKPAELIFFVDDVPIRRYPRKSEATYPSRPMYVYGSIWDASSWATEGGKYKADYKYQPFIGRYKNFRIQGCTSESSASCQPPSASPSGFGSLSPQQFRAMQWVQNSYMVYNYCHDPRRDHNLIPEC* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00413 302 PIRSF EndGlu_transf 11 302 IPR016455 GO:0010411|GO:0016762|GO:0042546
Lapu11g00413 302 Gene3D - 28 302 - -
Lapu11g00413 302 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 47 302 IPR044791 GO:0004553
Lapu11g00413 302 SUPERFAMILY Concanavalin A-like lectins/glucanases 47 302 IPR013320 -
Lapu11g00413 302 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 267 302 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Lapu11g00413 302 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 39 239 IPR000757 GO:0004553|GO:0005975
Lapu11g00413 302 FunFam Xyloglucan endotransglucosylase/hydrolase 35 302 - -
Lapu11g00413 302 Pfam Glycosyl hydrolases family 16 49 231 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00413 Lapu-Chr11 7271826 7273874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00413 15 302 Glycoside Hydrolase AT3G44990 65.292 2.80e-142 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00413 K08235 - gmx:100781528 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00495 5 4428919 4431319 Lapu11g00413 11 7271826 7273874 PCT