Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00378 ATGGCGCGAGTGGATCTGGACGGGAACCCCATCAAGCCCCTCACGATCTGCATGATCGGTGCCGGTGGGTTCATCGGCTCGCACCTCTGCGAGAAACTCATGTCCGAAACCCCTCACACGGTTCTCGCCTTGGATGTCTACAATGACAAGATCAAACACCTTCTCGAACCCGATTCTCTACCTTGGGCCGGTCGAATCACTTTCCACCGCCTCAACATCAAACACGATTCTCGCCTCGAAGGTCTCATCAAGATGGCAGATCTCACCATTAATCTCGCTGCGATTTGCACCCCGGCGGATTACAACACGCGCCCTCTCGACACCATTTACAGCAATTTCATCGACGCGCTCCCCGTGGTGAAATACTGTTCGGAGAATAACAAGCGCCTTATCCATTTCTCCACTTGCGAAGTGTACGGGAAAACGATTGGAGCCTTTCTCCCCAAAGATAGTCCTCTTCGTAAGGATCCGGCGTACTACGTTCTTAAAGAAGACGAATCTCCTTGCATTTTTGGTTCCATTGAAAAGCAGAGGTGGTCTTATGCCTGTGCTAAACAGTTGATTGAGAGGCTGATTTACGCTGAGGGTGCTGAAAATGGCTTGGAATTCACAATTGTTAGGCCTTTTAATTGGATTGGACCTAGAATGGATTTCATTCCTGGCATCGATGGTCCAAGTGAGGGTGTTCCTAGGGTTCTTGCATGCTTTAGCAATAATCTTCTCAGAGGAGAGCCCCTCAAGCTTGTGGACGGTGGACAGTCTCAAAGAACCTTTGTTTACATTAAAGATGCCATTGAAGCTGTCTTGTTGATGATTGAAAATCCTGCCAGGGCTAATGGTCATATATTTAATGTGGGTAACCCAAACAACGAGGTTACTGTTAGGCAGCTTGCTGAAATGATGATTCAGGTTTACTCGAAGGTAAGTGGAGAACAAACTCCTGAAACACCAACCATTGATGTGAGCTCAAAAGAATTCTATGGTGAGGGATATGATGACAGTGACAAGAGAATTCCTGACATGACCATAATAAACAGGCAGCTTGGTTGGAACCCTAAGACTTCACTTTGGGACCTGCTCGAATCCACTCTCACCTATCAGCACAGGACATATGCTGAAGCAATCAAGAAAGTAATTGCAAAACCCGTTGCAAGCTAA 1158 0.4706 MARVDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETPHTVLALDVYNDKIKHLLEPDSLPWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMIQVYSKVSGEQTPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPVAS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00378 385 Pfam NAD dependent epimerase/dehydratase family 16 286 IPR001509 -
Lapu11g00378 385 FunFam UDP-D-apiose/UDP-D-xylose synthase 2 14 377 - -
Lapu11g00378 385 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 15 370 - -
Lapu11g00378 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 368 IPR036291 -
Lapu11g00378 385 CDD Arna_like_SDR_e 15 370 IPR045869 GO:0016831
Lapu11g00378 385 Gene3D - 14 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00378 Lapu-Chr11 6880750 6883117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00378 14 380 Miscellaneous Gene Families AT1G02000 20.972 1.36e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00378 K12449 - gmx:102667779 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00516 5 4666207 4669063 Lapu11g00378 11 6880750 6883117 PCT