Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00318 ATGAAAATCTCTATTAGGTGGCCAACTGTTGCATTATCTCAGTTTCTGTGCCTAAAATTGTGGTGCTCTCAGCTGGGGTCATTGGCCATGATGATGATCAGATCAGTAATAACTAGTTGTTCCTTCTTCGTATCAACGCTTTTGTTTCTTCTCTCCATTTCGGGTTTGTTATTGAAAATCCATGGCCATGGTTTTGGAATCAACTACGGACAGATAGCCAACAATTTACCTCGTCCATCTCAAGTAGCTGTTCTTATAAAATCTTTGAATGTGAGTAGGATCAAACTGTATGATGCTGATCCAAATGTTTTAGTCGCCTTCTCCGAGTCCAATGTGGAATTCGTTATAGGACTTGGAAATGAGTACCTAGAGAACATGACAACCCCTTCTAAAGCTCAAACATGGATTCAGCAGCATGTCCAACCTTACTTCTCAAAGACCAAAATCACTTGTATCACTGTGGGAAATGAGGTGTTCAATAGCAATGATACTCAGCTGATGTTAAACCTCCTCCCAGCAATGCAAACTGTGCATGATGCCCTTGTTAATGTTGGACTAGACCAACAAGTTACTGTCACAACCGCTCATTCCTTCAACATATTATCCAGTTCCTACCCTCCTTCATCTGGGGCTTTTAGGGAAGATCTTGTGCAATATATCCAACCCCTTCTCGACTTTCATGCTCAAATCAACTCACCTTTTCTCATCAATGCATACCCTTTCTTTACATACAAAGACAATCCAAATGTGGTTCCCTTAAACTATGTGCTTTTTCAGCCAAATCAAGGCATGGTTGATCCAAATACCAATTTGCATTATGACAACATGTTATATGCTCAAATTGATGCTGCCTATGCTGCCATCAAACAAATGGGGCATGATGACATTCAAGTGAGGATTTCTGAGACTGGTTGGCCTTCTAATGGTGACCCTGAAGAGATTGGAGCTACACCACAGAATGCAGCACTGTATAATGGTAACCTGCTCAAAAGGATAGAGCAGAAACAAGGCACTCCGGCAAAACCATCGGTTCCAATTGATATATATGTCTTTGCACTTTTTAATGAGGATTTGAAGCCCGGTCCAGCATCAGAGAGAAACTATGGCCTTTACTATCCTAATGGTTCTCCAGTTTATAACATTGGATTGAAGGGTTATCTCCCACAGATGCCTATGGCAGCTAAATCCAATATTTTGTCTGTCAATTTTCTTTTATTTATACTTACAAGCCTCATCTTTGCTTTGGAGCTTTCAAGATGGTGA 1263 0.4062 MKISIRWPTVALSQFLCLKLWCSQLGSLAMMMIRSVITSCSFFVSTLLFLLSISGLLLKIHGHGFGINYGQIANNLPRPSQVAVLIKSLNVSRIKLYDADPNVLVAFSESNVEFVIGLGNEYLENMTTPSKAQTWIQQHVQPYFSKTKITCITVGNEVFNSNDTQLMLNLLPAMQTVHDALVNVGLDQQVTVTTAHSFNILSSSYPPSSGAFREDLVQYIQPLLDFHAQINSPFLINAYPFFTYKDNPNVVPLNYVLFQPNQGMVDPNTNLHYDNMLYAQIDAAYAAIKQMGHDDIQVRISETGWPSNGDPEEIGATPQNAALYNGNLLKRIEQKQGTPAKPSVPIDIYVFALFNEDLKPGPASERNYGLYYPNGSPVYNIGLKGYLPQMPMAAKSNILSVNFLLFILTSLIFALELSRW* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00318 420 Gene3D Glycosidases 64 387 - -
Lapu11g00318 420 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 51 384 IPR044965 GO:0004553|GO:0005975
Lapu11g00318 420 FunFam Glucan endo-1,3-beta-glucosidase 14 63 387 - -
Lapu11g00318 420 Pfam Glycosyl hydrolases family 17 66 381 IPR000490 GO:0004553|GO:0005975
Lapu11g00318 420 SUPERFAMILY (Trans)glycosidases 65 381 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00318 Lapu-Chr11 6202529 6206745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00318 115 414 Glycoside Hydrolase AT2G27500 67.442 1.92e-157 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00318 - - ccaj:109798347 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00562 5 5112242 5116361 Lapu11g00318 11 6202529 6206745 PCT