Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01530 ATGTTTTCCAACTGTTTTCAAGCGAAACCGTTGTGCAGAGCTTCAATTGGGTCGGATCTTAGTATCAGTTTCAGTTCGGGTCTAGGCACCATGTTAAAGAATCATTGTAGTTGTAGCATGTCGTTCGCAGGACCTAGTTCAGTGTTTTTCCGCTCCGTTGCCAGCACTTGCAGCAAGAGGAAAGATCCCGGGAATACATACTGGAAGCCTCCACAAGCATATGCAAGAAATGATTTTCACCTCCCAATGAGCAGTTCAGTGGTTAAAAATAGGACATTGATTGAGGACATTAGGAGTCTGCGATTGATAACTGCGATTAAAACTCCATACTTACCTAACGGCCAATTTGATCTTGATGCATATGATAACTTGGTATCCATGCAAATTGCAAATGGCAGTGAAGGTATTCTTGTTGCCGGCTCAACTGGTGAAGGCCAACTAATGACCTGGAGTGAACAAATAATGCTTATTGCACACACAGTTAACTGTTTTGGTGACAAAGTTAAGGTTGTTGGTAATGCTGGAAGCAACTGCACCTCAGAGGCAATTAAGGCCACTGAGAGGGGTTTTGCCGTTGGAATGCATGCTGCACTTCATATAAACCCTTACTACGGCAAAACTTCTTTGGATGGTTTGGTTGCTCACTATAACAGTGTACTTTCCATAGGTCCTATCATTATATATAACATACCTACAAGGACTAATCAAGATATTCCTCCTAGTGTAGTTCAAACCTTGGCCCAAAGTCCTAATTTGGTTGGTGTGAAGGAGTGTGTGGGAACTGAGAGGATCAAACAATATACAGATCAAGGGCTTGTTGTATGGACAGGAATTGATAAAATAAGCCATGATGCTAGATGGGATTTTGGTGCTGTTGGAGTTCAATCTGTTGCTGGCAACCTGGTTCCTGGTTTGATGAGAGAACTCATGTGTGAAAGCAAGAATGTTACACTGAATTCAAAGCTGATCCCTATGTTTGATTGGCTTTCTCAAGAACCCGTCCCTATTGCTTTGAACACTGCTCTTGCTCAACTTGGGGTCATCAAACCAGTTTTCAGGCTACCCCATGTTCCCTTGCCTGTGGATAAAAGGATAGAGTTTGTCAATTTGGTGAAGCAAATGGGTCGAGAGCATTTTGTTGGAGAAAAAGATGCTCAAGTTCTTGATGATGATGACTTTATTATAGTTGGTCGATATTGA 1200 0.4208 MFSNCFQAKPLCRASIGSDLSISFSSGLGTMLKNHCSCSMSFAGPSSVFFRSVASTCSKRKDPGNTYWKPPQAYARNDFHLPMSSSVVKNRTLIEDIRSLRLITAIKTPYLPNGQFDLDAYDNLVSMQIANGSEGILVAGSTGEGQLMTWSEQIMLIAHTVNCFGDKVKVVGNAGSNCTSEAIKATERGFAVGMHAALHINPYYGKTSLDGLVAHYNSVLSIGPIIIYNIPTRTNQDIPPSVVQTLAQSPNLVGVKECVGTERIKQYTDQGLVVWTGIDKISHDARWDFGAVGVQSVAGNLVPGLMRELMCESKNVTLNSKLIPMFDWLSQEPVPIALNTALAQLGVIKPVFRLPHVPLPVDKRIEFVNLVKQMGREHFVGEKDAQVLDDDDFIIVGRY* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01530 399 ProSitePatterns Dihydrodipicolinate synthase signature 2. 228 258 IPR020625 GO:0016829
Lapu10g01530 399 SUPERFAMILY Aldolase 102 374 - -
Lapu10g01530 399 ProSitePatterns Dihydrodipicolinate synthase signature 1. 135 152 IPR020624 GO:0016829
Lapu10g01530 399 CDD DHDPS 101 371 IPR005263 GO:0008840|GO:0009089
Lapu10g01530 399 Gene3D Aldolase class I 93 399 IPR013785 -
Lapu10g01530 399 PANTHER DIHYDRODIPICOLINATE SYNTHASE 85 384 IPR002220 GO:0016829
Lapu10g01530 399 PRINTS Dihydrodipicolinate synthase signature 200 216 IPR002220 GO:0016829
Lapu10g01530 399 PRINTS Dihydrodipicolinate synthase signature 223 240 IPR002220 GO:0016829
Lapu10g01530 399 PRINTS Dihydrodipicolinate synthase signature 132 153 IPR002220 GO:0016829
Lapu10g01530 399 PRINTS Dihydrodipicolinate synthase signature 168 186 IPR002220 GO:0016829
Lapu10g01530 399 Pfam Dihydrodipicolinate synthetase family 100 373 IPR002220 GO:0016829
Lapu10g01530 399 SMART DHDPS_2 99 375 IPR002220 GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01530 Lapu-Chr10 26437926 26440203 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01530 K01714 - gmx:100806626 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01648 1 29339242 29342968 Lapu10g01530 10 26437926 26440203 PCT