Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00758 ATGATGACAATGAGGACAAAGCAAAGTTTTTTGTGGTGTGTCTGGATTTTGCTTTGTGGGTCTTGTGTGGGAACGTTTGTGGTGGAGAAGAACAATTTGAAAATTTCTTCTCCAAACTCATTGAAAGGTATATATGAATGTGCAATTGGGAATTTTGGGGTCCCCAAGTATGGAGGAACCATGATTGGCTCAGTGGTGTACCCCAAGATAAATCAGAATGGATGTAAACCCTTTGATTCCTCGTTGAGTTCCAAGCCCGGGACCTTCCCCAGCTTTGTTCTTATTGACCGAGGAGAGTGCTTCTTCACTTTAAAGGCGTGGAATGCACAGAAAGGTGGTGCAGCGGCCATTCTTGTTGCAGATGATAGGACAGAACCATTGATCACCATGGACACACCTGAAGAAGGAAATGGTGCTAGCAATGACGATTATATCGAGAAGATCAGCATTCCTTCTGCCCTTATCAGCAAATCACTAGGGGATAGCATCAAGAGTGCCCTCTCTGGTGGGGAAATGGTTAATGTAAATCTTGATTGGAGAGAGGCTCTTCCTCACCCTGATGAGAGAGTTGAGTATGAGTTTTGGACAAGTAGCAATGATGAGTGTGGACCAAAGTGTGAAACTGAAATTAACTTTGTCAAGGGTTTTAAAGGGGCAGCTCAATTACTTGAGCAGAAAGGGTTTGCAAAGTTTACCCCTCACTATATAACTTGGTATTGTCCAGAAGCATTTATACTGAGCCAACAGTGCAAGTCCCAGTGCATAAATAATGGGAGATACTGTGCACCAGATCCTGAGCTAGATTACAAAAGAGGGTACAGTGGTAGAGATGTTGTTATCCAAAACTTACGTCAAGTATGCTTCTTTAAAGTGGCAAATGAAAGTGGAAAGCCTTGGCAATGGTGGGACTACGTCACTGACTTTTCAATCCGTTGCCCAATGAGAGAGAATAAGTATACTGAAGAATGCTCAGATCAAATTATTAAATCTCTTGGTGTCGATTTGAAGAAAGTTCAAGATTGTGTTGGAGACCCTAATGCAAATGTCGACAACCCTGTTCTCAATAATGAACAGGATTCACAGATTGGTAACGGCGACCGAGGGGATGTTACTATACTACCTACTCTTATTATAAACAACAGACAATATAGAGGTAAGCTGTCAAAAGCAGCAGTACTCAAGGCACTCTGTTCAGGTTTCCAAGAGACTACTGAGCCATCAATTTGTCTAACTCCAGACATGGAAACTAATGAGTGTATGCAAAACAATGGTGGTTGTTGGCAGGACAATGCTGCCAACATCACTGCGTGCAGGGACACTTTCAGAGGAAGAATATGTGAATGCCCAATTGTACAAAATGTCCAGTTTGTGGGTGATGGATATACCCATTGTGAAGCAGCTACAGGCGCTTTGAGGTGTGCAATCAACAACGGAGGTTGTTGGAAAGAAACCCAAGGTAGCACAACTTACTCTGCTTGCATTGATGACCACACTAAAGGTTGCAAGTGTCCACCTGGATTCAGGGGAGATGGAGTCAACTCCTGTGAAGATGTGGATGAATGCAAGGAGAAATTGGCCTGCCAGTGCCCAGAATGCCAATGCAAAAATACTTGGGGAAGTTATGAATGCTCGTGTACTGATGGTTTGTTCTACACGCGAGAAAATGATATGTGCATTGGAAAATATGCTGCTTCAGTGGCCGGTGGGGGCATTGTTTGGATGGTTATTCTGATCTTGGCTGTTGCTGGTGCTGGGGGGTATGCATTTTACAAGTACAGAATCCGGAGATACATGGACTCAGAGATAAGGGCAATCATGGCCCAATATATGCCTTTGGATAATCAACCGGAGACTTCTAATCAAGCTCATGAAGATGTCTAG 1881 0.4343 MMTMRTKQSFLWCVWILLCGSCVGTFVVEKNNLKISSPNSLKGIYECAIGNFGVPKYGGTMIGSVVYPKINQNGCKPFDSSLSSKPGTFPSFVLIDRGECFFTLKAWNAQKGGAAAILVADDRTEPLITMDTPEEGNGASNDDYIEKISIPSALISKSLGDSIKSALSGGEMVNVNLDWREALPHPDERVEYEFWTSSNDECGPKCETEINFVKGFKGAAQLLEQKGFAKFTPHYITWYCPEAFILSQQCKSQCINNGRYCAPDPELDYKRGYSGRDVVIQNLRQVCFFKVANESGKPWQWWDYVTDFSIRCPMRENKYTEECSDQIIKSLGVDLKKVQDCVGDPNANVDNPVLNNEQDSQIGNGDRGDVTILPTLIINNRQYRGKLSKAAVLKALCSGFQETTEPSICLTPDMETNECMQNNGGCWQDNAANITACRDTFRGRICECPIVQNVQFVGDGYTHCEAATGALRCAINNGGCWKETQGSTTYSACIDDHTKGCKCPPGFRGDGVNSCEDVDECKEKLACQCPECQCKNTWGSYECSCTDGLFYTRENDMCIGKYAASVAGGGIVWMVILILAVAGAGGYAFYKYRIRRYMDSEIRAIMAQYMPLDNQPETSNQAHEDV* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00758 626 CDD EGF_CA 517 548 - -
Lapu10g00758 626 Gene3D Laminin 410 458 - -
Lapu10g00758 626 FunFam vacuolar-sorting receptor 1 409 465 - -
Lapu10g00758 626 FunFam Vacuolar-sorting receptor 1 23 186 - -
Lapu10g00758 626 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 2 619 - -
Lapu10g00758 626 Gene3D - 23 186 - -
Lapu10g00758 626 SMART egfca_6 517 559 IPR001881 GO:0005509
Lapu10g00758 626 Pfam PA domain 63 163 IPR003137 -
Lapu10g00758 626 SUPERFAMILY PA domain 92 173 IPR046450 -
Lapu10g00758 626 Gene3D Laminin 471 555 - -
Lapu10g00758 626 ProSitePatterns Calcium-binding EGF-like domain signature. 517 543 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00758 Lapu-Chr10 9389816 9395234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00758 15 626 Miscellaneous Gene Families AT3G52850 70.340 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00758 - - gmx:100815266 1224.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01704 1 29965437 29971158 Lapu10g00758 10 9389816 9395234 PCT