Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00502 ATGAATTTCTTCAACTGGCTCCGTTTATTCATGGTTTTTCAAATCTTTGCTGCAACACCCCGCTTCTTCTCGTTAACAGATTCATCCACACAACTTCCCATCAACTTTCTAGATGCTGCCAAGAAGCCTGAGGCATTTGACTGGATGGTCAGAATAAGAAGGAAGATTCACGAGATTCCAGAATTGGGTTATGAGGAATTTGAGACCAGTAAACTGATTAGAGCGGAATTGGATCAACTGGGTATACCCTATAAACACCCTGTTGCAATCACTGGTGTAATTGGCTTCATTGGGACCGGAAGATCGCCCTTTGTTGCTATAAGAGCTGATATGGATGCTCTTCCCATGCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCACGCTTGTGGTCATGATGCTCACGTGGCCATGCTCCTTGGCGCTGCGAAGATTCTTAAACAGCATGAAAATGAGATACAAGGAACTGTAGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGCGGGGGAGCCAAGAAAATTTTAGATGCTGGAGCCTTAGAAAATGTTACAGCTATTTTTGGATTGCATGTGTCACGTGACTTTCCATTCGGTGAAGTGGCCTCTAGGTCTGGTCCAATGTTGGCTGGAAATGGTTTCTTTGAAGCTATAATAAGGGGAAAAGGAGGTCATGCAGCTATTCCTCAACAATCTATAGACCCTATATTGGCAACTTCTAATGTTATAATTAGCTTACAGAATCTTGTTTCTCGTGAGGCTGATCCTCTGGATTCCCAGGTTGTGACTGTAGGAAAATTCCAAGGAGGTAGTGCATTCAATATCATCCCAGATTCTGTCTCGATCGGTGGCACCTTCCGAGCTTTTTCAAAAGACAGCTTCCAGCAATTAAGACAGCGTATTGAGCAGTTTTCATTACACGTGATCCTGGCAGGGGCTAAGGCTGATTCGTTTATGCAGGTTGTGATTGCACAAGCTGCTGTGCAGAGGTGCAATGCAACAGTCAACTTCCTTCAAGATCGGCATCCTTTCTTTCCTGTAACTATAAACAACGGTGACTTGCACGAACATTTTCGGAGTGTTGCAGGGAATTTGCTGGGCATCAATAAAGTAAATGACATGAAACCATTGATGGGAGCTGAAGATTTTGCATTCTATCAAGAAGTTATACCTGGCTACTTTTTCATGATTGGAATGCAGAATGCCTCACTTGAAAAACTTGAGCAAGTACACTCACCCTATTTCAAGGTCAATGAAGATGTACTTCCTTATGGGGCTGCACTTCACGCCTCATTAGCTGTTAGTTATCTTCTGAAACATCCGCAGGACATAGCCCCTGCAGAGGGGAAATATCATGATGAATTGTAA 1380 0.4362 MNFFNWLRLFMVFQIFAATPRFFSLTDSSTQLPINFLDAAKKPEAFDWMVRIRRKIHEIPELGYEEFETSKLIRAELDQLGIPYKHPVAITGVIGFIGTGRSPFVAIRADMDALPMQEMVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKQHENEIQGTVVLVFQPAEEGGGGAKKILDAGALENVTAIFGLHVSRDFPFGEVASRSGPMLAGNGFFEAIIRGKGGHAAIPQQSIDPILATSNVIISLQNLVSREADPLDSQVVTVGKFQGGSAFNIIPDSVSIGGTFRAFSKDSFQQLRQRIEQFSLHVILAGAKADSFMQVVIAQAAVQRCNATVNFLQDRHPFFPVTINNGDLHEHFRSVAGNLLGINKVNDMKPLMGAEDFAFYQEVIPGYFFMIGMQNASLEKLEQVHSPYFKVNEDVLPYGAALHASLAVSYLLKHPQDIAPAEGKYHDEL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00502 459 PANTHER PEPTIDASE M20 FAMILY MEMBER 28 447 IPR017439 GO:0016787
Lapu10g00502 459 Pfam Peptidase family M20/M25/M40 106 437 IPR002933 GO:0016787
Lapu10g00502 459 CDD M20_IAA_Hyd 49 441 IPR044757 GO:0009850|GO:0016787
Lapu10g00502 459 FunFam N-acetyldiaminopimelate deacetylase 214 349 - -
Lapu10g00502 459 SUPERFAMILY Bacterial exopeptidase dimerisation domain 215 308 IPR036264 -
Lapu10g00502 459 Pfam Peptidase dimerisation domain 216 308 IPR011650 -
Lapu10g00502 459 Gene3D Zn peptidases 49 426 - -
Lapu10g00502 459 NCBIfam amidohydrolase 49 428 IPR017439 GO:0016787
Lapu10g00502 459 Gene3D - 214 349 - -
Lapu10g00502 459 SUPERFAMILY Zn-dependent exopeptidases 44 443 - -
Lapu10g00502 459 PIRSF Amidohydrol_AmhX 35 445 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00502 Lapu-Chr10 7385407 7392725 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00502 K21604 - gmx:100789077 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00214 5 1771541 1775472 Lapu10g00502 10 7385407 7392725 PCT