Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00488 ATGACCTCACAGTTTATTACAACATACATTTGTTTCAGTGCATTCAAAATGGCTGAGATTATAGTGATTTTTGACTTTGACTCAACAATCATTGAGTGTGATAGTGATAATTGGGTGCTTGATGACACTGCTTTAACTCAAAAGTTTTACCAGCTTCTTCCTAGCATGGCCTGGAACCCTCTGATGGATAAGATGATGAAAGTACTTCATTCACAAGGAAAAACCATAGAAGATATTGTGGAAATTCTGAAGAGGACACCAATGCATCCTTCCATTGTCCCTACCATTGAGGCAGTTTATTCTCTTGGGTGTGATCTAAAGATTGTGAGTGATGCAAATCTTTTCTTTATTGAGACAATTCTGAAGCATCATGGAGTGTGGAACTGTTTCTCAGAAGTCATTTGTAACCCAAGCCATGTCAAGGAAGGGAGGCTCAATATTTGTCCATACCATGATTATCTAAACTCTTCCCATGGATGCAATCTTTGTCCACCAAACATGTGCAAGGGATTGGTGATAGAAAGGATCCAAAATTCCTTGGCAGAAGGAGGAAAGAAGAAAGTAATCTATCTTGGAGATGGAAGTGGAGATTTTTGCCCAAGTCTGAAGCTAAAAGAAAATGATTATCTGATGCCAAGAACAGACTTTGCATTGTGTGATTTAGTTTCTAAAAATTCCAATAAGATAAAGGCAGAGGTGCATGGTTGGAGAGATGGGAAAGAGCTTCAACATGTTCTACTCCATCTCATCAACAAAGCTATTGGAGAAGGAAACAACATCATTAACAATTCTCCTCAAACAATTTCACTTGATTGCAAGTTGGTTCCAACTCCTATTGACATTCATAAACCTTTGCCTAAAGCCCTCTCAGTTCCTCAATAA 882 0.3832 MTSQFITTYICFSAFKMAEIIVIFDFDSTIIECDSDNWVLDDTALTQKFYQLLPSMAWNPLMDKMMKVLHSQGKTIEDIVEILKRTPMHPSIVPTIEAVYSLGCDLKIVSDANLFFIETILKHHGVWNCFSEVICNPSHVKEGRLNICPYHDYLNSSHGCNLCPPNMCKGLVIERIQNSLAEGGKKKVIYLGDGSGDFCPSLKLKENDYLMPRTDFALCDLVSKNSNKIKAEVHGWRDGKELQHVLLHLINKAIGEGNNIINNSPQTISLDCKLVPTPIDIHKPLPKALSVPQ* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00488 293 SUPERFAMILY HAD-like 15 201 IPR036412 -
Lapu10g00488 293 Pfam Putative Phosphatase 20 250 IPR016965 GO:0016791
Lapu10g00488 293 Gene3D - 6 204 IPR023214 -
Lapu10g00488 293 PIRSF PLP_phosphatas_PHOSPHO2 9 254 IPR016965 GO:0016791
Lapu10g00488 293 PANTHER PHOSPHATASE, ORPHAN 1, 2 17 254 IPR016965 GO:0016791
Lapu10g00488 293 NCBIfam HAD-IB family phosphatase 22 202 - -
Lapu10g00488 293 NCBIfam MtnX-like HAD-IB family phosphatase 20 213 IPR006384 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00488 Lapu-Chr10 7242132 7244372 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00488 K13248 - gmx:100785357 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00488 10 7242132 7244372 Lapu5g00221 5 1817060 1818792 ECH
Lapu3g03725 3 60731556 60732707 Lapu10g00488 10 7242132 7244372 ECH
Lapu10g00488 10 7242132 7244372 Lapu10g00488 10 7242132 7244372 ECH
Lapu10g00488 10 7242132 7244372 Lapu5g00222 5 1821401 1823376 PCT