Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00462 ATGGCTTTGTTCATCTTCACTATTTATCTGTTGACTCTCTTTTCGGTCATTTATGGCACTGCATCAACCCATCTTCACACTCTGTCTTCTGATTCTGATTCTGATTCTTACAATCAACCTTACAGAACTGCTTATCACTTCCAACCTCCCAAGAATTGGATAAATGATCCCAATGGACCATTGCGATATGGAGGACTTTATCACCTGTTCTATCAGTACAATCCTAAAGGTGCAGTTTGGGGAAATATTGTGTGGGCACATTCAGTGTCAAAGGATCTTGTGAACTGGACCCCACTAGATCCTGCCATCTTCCCATCTCAGCCGTCTGATATAAATGGTTGTTGGTCAGGATCAGCCACACTGCTTCCTGGTAACAAACCAGCCATTTTATACACTGGAATTGACCCACAGAATCAACAGGTCCAAAACTTGGCCAAGCCCAAAAATTTGTCTGACCCTTTTCTTAGGGAATGGGTTAAGTCCCCCAAAAATCCTCAAATGGCACCAACTAGTGCCAATAAGATCAATTCAAGTTCATTTAGGGATCCCACCACTGCTTGGCTAGGCCAAGATGGACATTGGAGAGTACTTGTTGGGAGCAAAAGAAGAACTAGGGGAATGGCACTTTTGTATAGGAGCAAAAATTTTGTTGATTGGATTCAAGCCAAACACCCTTTGCATTCAACCCTAGGCAGTGGAATGTGGGAGTGCCCTGATTTTTTCCCGGTTTTGAACAATGGCCAATTGGGTGTTGACACATCTGTGAATGGTGATTATGTTAGGCACGTTCTCAAGGCTAGTTTGGATGACAAAAAACATGATTACTATATGATAGGGAGTTACAATGCTGCCAAAGATGCATTTATCCCAGATAAAGGGTTTAATGAATTTGTTTTAAGATATGATTATGGAAAATACTATGCCTCAAAAACTTTCTTTGATGATGGAAAGAAGAGAAGGGTTTTGCTTGGGTGGGTGAACGAATCATCAAGTGTTGCTGATGACATCAAGAAAGGATGGTCAGGAATCCATACAATTCCAAGGGCTATTTGGCTGCATAAGTCTGGTAAACAGTTGGTACAGTGGCCAGTGGAGGAAATTGAAAAGCTACGCACAAAACCAGTCAATTTGCCACCCCAAGACTTAAAAGGAGGCAAGTTGCTTCAAATTAATGGTGTCACAGCATCTCAGGCTGATGTTGAAATTTCATTTGAAGTGAGTGAACTGAGAAAGGCTGAAACATTGAAGTACTGGAGTGACCCCCAAATTCTCTGTAGCACAAAGGGTTCATCCCTTAGAAGTGGATTGGGTCCTTTTGGTTTACTAGTTTTTGCTTCAGAGGGATTGCAAGAGTTCACATCAGTTTTCTTCACAATATTCAGATACCAAGAAAGATATTTGGTACTCTTGTGCAGTGATCAGAGCAGGTCTTCCTTAAACAAGAACAATGATTTGACCACTTATGGAACTTTTGTGGACGTTGATCCTCTTCACGAAAACCTGTCATTGAGAACTTTGATTGATCATTCAGTGGTAGAGAGTTTTGGAGGAGAAGGAAGAGGGTGCATCACTGCCAGAGTTTATCCAACATTAGCAATAAATGATAAAGCACAAATATATGCTTTCAATAATGCTACTGCAGATGTGAAGATCACAAGATTGAGTGCTTGGAGCATGAAGAAAGCACAGATAAAGTGA 1698 0.4111 MALFIFTIYLLTLFSVIYGTASTHLHTLSSDSDSDSYNQPYRTAYHFQPPKNWINDPNGPLRYGGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDPAIFPSQPSDINGCWSGSATLLPGNKPAILYTGIDPQNQQVQNLAKPKNLSDPFLREWVKSPKNPQMAPTSANKINSSSFRDPTTAWLGQDGHWRVLVGSKRRTRGMALLYRSKNFVDWIQAKHPLHSTLGSGMWECPDFFPVLNNGQLGVDTSVNGDYVRHVLKASLDDKKHDYYMIGSYNAAKDAFIPDKGFNEFVLRYDYGKYYASKTFFDDGKKRRVLLGWVNESSSVADDIKKGWSGIHTIPRAIWLHKSGKQLVQWPVEEIEKLRTKPVNLPPQDLKGGKLLQINGVTASQADVEISFEVSELRKAETLKYWSDPQILCSTKGSSLRSGLGPFGLLVFASEGLQEFTSVFFTIFRYQERYLVLLCSDQSRSSLNKNNDLTTYGTFVDVDPLHENLSLRTLIDHSVVESFGGEGRGCITARVYPTLAINDKAQIYAFNNATADVKITRLSAWSMKKAQIK* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00462 565 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 50 375 - -
Lapu10g00462 565 SUPERFAMILY Arabinanase/levansucrase/invertase 36 364 IPR023296 -
Lapu10g00462 565 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 33 564 - -
Lapu10g00462 565 Pfam Glycosyl hydrolases family 32 N-terminal domain 46 363 IPR013148 -
Lapu10g00462 565 Pfam Glycosyl hydrolases family 32 C terminal 366 558 IPR013189 -
Lapu10g00462 565 CDD GH32_Fruct1-like 52 352 - -
Lapu10g00462 565 SUPERFAMILY Concanavalin A-like lectins/glucanases 363 561 IPR013320 -
Lapu10g00462 565 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 375 559 - -
Lapu10g00462 565 Gene3D - 374 559 - -
Lapu10g00462 565 ProSitePatterns Glycosyl hydrolases family 32 active site. 46 59 IPR018053 GO:0004553|GO:0005975
Lapu10g00462 565 Gene3D Glycosyl hydrolase domain; family 43 50 373 IPR023296 -
Lapu10g00462 565 SMART glyco_32 46 519 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00462 Lapu-Chr10 6988362 6993835 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00462 63 564 Glycoside Hydrolase AT3G13790 64.062 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00462 K01193 - gmx:100777339 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00242 5 2007313 2010891 Lapu10g00462 10 6988362 6993835 PCT