Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00438 ATGGAGAAGAATCCTGAAAAGGCTTATTTGAGAACAATTACACCTAAGTATCAGACTCTTATGGACCTTTCAGTGATAGAGATGTTATCAAAACATGCTTCCGATGAGGTCTACCTCGGACAGAGGGACAATCCATATTGGACCTCAAATCCAAGGGCAATAGAAGCCTTTAAAAGGTTTGGAGAAAAGCTAGCAGAGATTGAGAAAAAAATCTCAGAAAGGAACCATGATCCAAATCTTAAAAATCGAACTGGACCAGTTCAATTACCATACACTGTACTTCTTCCGACCAGTGAAGCAGGGTTGACTTTCAAAGGAATTCCAAACAGCATCTCTATCTAA 342 0.3947 MEKNPEKAYLRTITPKYQTLMDLSVIEMLSKHASDEVYLGQRDNPYWTSNPRAIEAFKRFGEKLAEIEKKISERNHDPNLKNRTGPVQLPYTVLLPTSEAGLTFKGIPNSISI* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00438 113 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1 113 IPR013819 GO:0016702|GO:0046872
Lapu10g00438 113 Gene3D - 1 112 - -
Lapu10g00438 113 PANTHER LIPOXYGENASE 2 113 IPR000907 GO:0016702|GO:0034440|GO:0046872
Lapu10g00438 113 SUPERFAMILY Lipoxigenase 2 113 IPR036226 -
Lapu10g00438 113 Pfam Lipoxygenase 1 96 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00438 Lapu-Chr10 6791173 6791685 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00438 1 113 Acyl Lipid Metabolism Gene Families AT1G55020 61.062 1.72e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00438 K15718 - gmx:547694 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00438 10 6791173 6791685 Lapu5g00261 5 2144966 2148837 PCT