Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1505 ATGATAGAAGAGGGAGAGATGGGAGAGATGGGAGAGAAATCATGTGAAATAGAAGAGAGGGTTGGTTTGTTTGAAAGAAAGGAAGTAAGAAAGAGAGGAGTATACAAGGTATTTGCAAGTACAATATTTGCAGCTATATGTTTCATATGGGTTTACAGATTCAGAAACATCCCATACGATGATGATGATGATGATGATGGCAGATATTGGTATTGGTTACTTCTTTTCATGTCCGAGTTCGCTTTTGGACTCTACTGGATTATCACTCAGTCTGTTCGTTGGAGAATTGTTTATCACACTCCCTTCAAACACACCCTCTTAAACAGATACGATGAACAGAAATTAGGAGGAGTAGACATATTTGTGTGCACAGCTGACCCAATATTAGAACCTCCAATGATAGTCATTAATACTGTATTATCGGCTATGGCATACAATTATCCTTCCAATAACCTAACTGTCTATCTCTCTGATGATGGAGGCTCAGATCTAACGTTCTATGCTCTCTTTAAGGCTTCTATTTTCTCTAAACATTGGGTCCCATTCTGCACAAGATTCAATATTCAACCTAGGTCACCTGAAGCTTACTTTGCTACCCAAAATTATACCACTAACTTTGCCCAAGAATGGTTATCTATCAAGAAATTATATGAAAACATGAAAAGAGATATTGAATCTGTCGTAGCAAATGGGAAGGTTCCAGATGATGCAAGAAAACAGCACAATGGTTTCTCAGAATGGAATCACAAAACGACAAAACAAGACCACCAATCTATTGTCCAAATCATGATCGATGGAAGAGATAAAAATGGTGTAGATGAAGATGGATATGGATTGGCAACATTGGTATACATGGCACGCGAGAAAAGACCCAATTATCCTCACCATTTCAAAGCTGGAGCTATGAATGCACTGATAAGAGTGTCATCAGAGATAACCAACGCTCCTTACATCCTCAACTTGGACTGTGACATGTACCCAAATAACGCAGATATAATTCATGAAGTACTATGTTTCTTCATGGATGAAGTAAAAGGTCACGACATAGCTTATGTTCAATTTCCGCAGAACTATAATAATCTCACCAACAATGACCATTATGCAAATTCATGTCTTGCCACCGATAAGTTAGAACTAGCAGGCATATGTGGACATGGAGCAGCCTTGTATTGTGGAACTGGATGTTTCCATCGAAGAGAAAGTCTATCAGGAACTTACTTCAAAGATTACTTACCAAATAAAGACACCAATCCTAAAAGAGAAGATAAGAGAACAGTGAATGAATTGAATGAAGCATCCAAAGCTCTTGCCACTTGCACCTTTGAGAAGGATACTCAATGGGGGAAGGAGATGGGGTTAGTGTATGGTATTCCTGTAGAAGACATTGCAACTGGCCTAGCAATCTCATGCAGGGGTTGGAAATCAATTTATTATAATCCAGAAAGAAAGGCTTTCTTGGGTGTAGCTCCGACAACCTTAGATGTAGCTCTTGTTCAGCATAAGAGGTGGTCAGAAGGCATGTTCCAAGTTTTCTTCTCCAAGTATTGCCCTTTCATTTATGGGCATGGGAAGATAAACTTTGGTTTACAAATGGGATATTGTGTCTACCTCTTATGGGCTCCAATGTCCCTTCCTACACTTTCTTATGTCATTGTTTCTCCTATTACCTTGCTTCGCGGCATTCCCTTATTCCCACAGCTTACAAGCCTGTGGTTCCTTCCCTTTGCTTATGCATTTGTTGCCACAAATGCTTATAGCCTAGGTGAGGCATTGAGTTGCGGGTCGACAATAAAAGGTTGGTGGAACTTACAACGAATGAGGCTCATCAGAAGGACCACCTCTTATCTCTTTAGCTTCATTGACAACATAACCAAGAAATTTGGGCTATCACAGACAAACTTTGTAATCACAGATAAGGTCGTGAGTGAGGATGTGCAAAAGAGATATGAGCAAGAGGTCATAGATTTTGGAAACTCTTCTAATTCAATAATGTTAACCATATTAGCAACTGTGGCATTGCTAAACCTTTTTGGTCTAGTTGGTGGTATCATGAGGATTGTGATCATGGATTTGGGATTCACCAGCTCAAGCCAATTGATGATACAGATTATGGTTAGTGCATTGGTGGTAATGGTGTATTTACCAGTGTATGAGGCACTTTTCATTCGCACTGATAAAGGAAGCATATCATCCTCAATCATGTTTAAGTCCATTGCTTTCATTTCATTGGGATGTTGCCTAGCACATTTCATATGA 2256 0.3941 MIEEGEMGEMGEKSCEIEERVGLFERKEVRKRGVYKVFASTIFAAICFIWVYRFRNIPYDDDDDDDGRYWYWLLLFMSEFAFGLYWIITQSVRWRIVYHTPFKHTLLNRYDEQKLGGVDIFVCTADPILEPPMIVINTVLSAMAYNYPSNNLTVYLSDDGGSDLTFYALFKASIFSKHWVPFCTRFNIQPRSPEAYFATQNYTTNFAQEWLSIKKLYENMKRDIESVVANGKVPDDARKQHNGFSEWNHKTTKQDHQSIVQIMIDGRDKNGVDEDGYGLATLVYMAREKRPNYPHHFKAGAMNALIRVSSEITNAPYILNLDCDMYPNNADIIHEVLCFFMDEVKGHDIAYVQFPQNYNNLTNNDHYANSCLATDKLELAGICGHGAALYCGTGCFHRRESLSGTYFKDYLPNKDTNPKREDKRTVNELNEASKALATCTFEKDTQWGKEMGLVYGIPVEDIATGLAISCRGWKSIYYNPERKAFLGVAPTTLDVALVQHKRWSEGMFQVFFSKYCPFIYGHGKINFGLQMGYCVYLLWAPMSLPTLSYVIVSPITLLRGIPLFPQLTSLWFLPFAYAFVATNAYSLGEALSCGSTIKGWWNLQRMRLIRRTTSYLFSFIDNITKKFGLSQTNFVITDKVVSEDVQKRYEQEVIDFGNSSNSIMLTILATVALLNLFGLVGGIMRIVIMDLGFTSSSQLMIQIMVSALVVMVYLPVYEALFIRTDKGSISSSIMFKSIAFISLGCCLAHFI* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1505 751 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 248 408 IPR029044 -
Lan9g1505 751 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 108 205 IPR029044 -
Lan9g1505 751 SUPERFAMILY Nucleotide-diphospho-sugar transferases 132 515 IPR029044 -
Lan9g1505 751 Pfam Cellulose synthase 118 404 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lan9g1505 751 Pfam Cellulose synthase 424 727 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lan9g1505 751 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 16 747 - -
Lan9g1505 751 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN CSLE 16 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1505 Lan-Chr9 21628013 21633508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1505 23 748 Glycosyltransferase AT1G55850 47.188 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1505 - - gmx:100779861 1122.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1362 2 24294424 24298280 Lan9g1505 9 21628013 21633508 LSH