Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1362 ATGAAGAGTGGTGAACATTTTTCATTGTTTGAGACAACTAGAGTTAGAGGATGGTTTATCCGCAGAGTATTTTCAATCTCAATGTTTGTAGCCATATGCTTCATATGGCTTTTCAGATTGAGCCATAAGGGTCATCCATATTGGCCATGCCTTGCTTTATTTGCTGCAGAAATATGGTTCGGTTTCAGTTGGCTCTTTAGTCAATCCCTCAGATGGAATCTTATCTTCAGGAAAACCTTCAAAACTAGGCTCTCCCAAAGATACGAAGATAAGAGTTTGCCGAGTGTGGACATATTTGTATGTACGGCGGACCCGGATATTGAACCACCAATAATGGTGATAAATACAGTGTTATCTGTTATGTGTTATGATTATCCAGCTGAGAAAATTAGTGTGTATCTCTCTGATGATGCTGCTTCTGATATCACTTTCTATGCTCTTCTAGAAGCTTCTACTTTTGCTAAACATTGGTTACCATTTTGCAAGAGATTCAATGTGCAACCTACTTCACCTGCTGCTTATTTTAATACCCTTCATCACTCAAAACCTTATCCACAAAACTTGGAACTCGTCAAGAAATTATACGAAGATATGAAAATAAGAATCGAAGATGCAGCTAAGTTGGGAAGAGTGGCCAAGGAAATACGTTCAAACAATCACAGATTTTCTCAATGGGATTCGTATTCTTCTCGACGTGACCATGACACAATTCTTCAAATCCTACTTCATAAAAACGACAAGCATAATTCTAAAGATGTAGATGGATTTATTTTACCAACACTAGTGTATTTGGCTCGTGAGAAGAGACCTCAATATCATCACAATTTCAAAGCTGGTGCAATGAATGCTTTGATAAGGGTGTCTTCAAATATTAGCAATGCAAAAGTGATTCTAAATGTAGATTGTGACATGTACTCAAACAATTCACAATCAGTGAGAGATATTCTTTGTTTTTTCATGGATGATGAGAAAGGCCATGAAATTGCTTATGTTCAGTATCCACAGAATTTTCAAAATCTCACCAAAAATGATTTATATGGGAATGCTATGTTTATACCTAGTGAGGTGGAGCTCCATGGTGCAGATGGTTATGGTGGCCCATTGTATATTGGAACTTGCTGCTTTCATAGAAGAGATGCTCTAAGTGGGAAGAAGTATGATAGTGGATATAGGATTGATTGGAAGAATGAGATTGACCATGCCATAGAATCAAATTTACAAGAACTAGAAGAAAAATCAAAAGCTTTAGCAAGGTGCACTTATGAAGAAAACACTCTATGGGGGAAAAAGATGGGTTTAAGATATGGGTGTCTAGTAGAGGATGTGATAACAGGATTATCAATACAATCACAAGGGTGGAAATCAGTGTACTACAACCCAATGAGAAAGGGTTTCTTAGGTGTTGCTCCAACAACTTTGCTTCAAATACTTGTTCAACATAAGAGGTGGTCTGAAGGACATTTTCAAATTATGTTTTCTAACTATAGTCCTTTGTGGCATGCTCCTGGAACCATAAAACTTGGTCTAAGAATGGGTTATTTGCACTTTAACTCATGGGCAACTACCTCTTTGCCAATACTATGTTACTCCATTATCCCTTCACTATATCTCCTTAATGGCATTCCATTGTTCCCTAAGATATGTAGCCTATGGTTTATACCATTTGCATATGTAATACTTGGGGAGAGTATTTATAGTTTGGTAGAGTTTTTGATATTTGGAGGCACAATCCAAGGTTGGTGGAATGATCTTAGAATGTGGTTGTATAAAGGAACAAGCTCTTATCTATTTGCTTTCATAGACAACATCTTCAAGTTCTTTGGGCTATCAGATTCACCCTTTACAATCACAACTAAGATCATGGATGAAGATGTTTCCCAACGTTATGAGAAAGAAGTTATGGAATTTGGAGCATCTTCTCCATTGTTCACTATATTAGCAACACTTGCATTGTTCAACTTGTTTTGCTTACTTTCCACTTTAAAGGACTTGTTGGTCCTTGGTGAAAATGGTTTTAGAGATTATGAGGAAATGGTGTTGCAGATTCTGTTGTGTGGTTTTCTAGTTTTGATCAATTTTCCAATATACCAAGGACTTTTCTTAAGGAAGGACAAGGGAAGATTGCCAAGTTCTCTTGTTATTAAATCAACAACATTGGCTCTTAGTGCATGTATTATCTCCAAAATTTTCATATGA 2196 0.367 MKSGEHFSLFETTRVRGWFIRRVFSISMFVAICFIWLFRLSHKGHPYWPCLALFAAEIWFGFSWLFSQSLRWNLIFRKTFKTRLSQRYEDKSLPSVDIFVCTADPDIEPPIMVINTVLSVMCYDYPAEKISVYLSDDAASDITFYALLEASTFAKHWLPFCKRFNVQPTSPAAYFNTLHHSKPYPQNLELVKKLYEDMKIRIEDAAKLGRVAKEIRSNNHRFSQWDSYSSRRDHDTILQILLHKNDKHNSKDVDGFILPTLVYLAREKRPQYHHNFKAGAMNALIRVSSNISNAKVILNVDCDMYSNNSQSVRDILCFFMDDEKGHEIAYVQYPQNFQNLTKNDLYGNAMFIPSEVELHGADGYGGPLYIGTCCFHRRDALSGKKYDSGYRIDWKNEIDHAIESNLQELEEKSKALARCTYEENTLWGKKMGLRYGCLVEDVITGLSIQSQGWKSVYYNPMRKGFLGVAPTTLLQILVQHKRWSEGHFQIMFSNYSPLWHAPGTIKLGLRMGYLHFNSWATTSLPILCYSIIPSLYLLNGIPLFPKICSLWFIPFAYVILGESIYSLVEFLIFGGTIQGWWNDLRMWLYKGTSSYLFAFIDNIFKFFGLSDSPFTITTKIMDEDVSQRYEKEVMEFGASSPLFTILATLALFNLFCLLSTLKDLLVLGENGFRDYEEMVLQILLCGFLVLINFPIYQGLFLRKDKGRLPSSLVIKSTTLALSACIISKIFI* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1362 731 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 84 182 IPR029044 -
Lan2g1362 731 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 390 IPR029044 -
Lan2g1362 731 Pfam Cellulose synthase 415 722 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lan2g1362 731 Pfam Cellulose synthase 96 385 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lan2g1362 731 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 728 - -
Lan2g1362 731 SUPERFAMILY Nucleotide-diphospho-sugar transferases 111 533 IPR029044 -
Lan2g1362 731 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 5 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1362 Lan-Chr2 24294424 24298280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1362 9 724 Glycosyltransferase AT1G55850 54.207 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1362 - - gmx:112999362 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1362 2 24294424 24298280 Lan2g1362 2 24294424 24298280 ECH
Lan2g1362 2 24294424 24298280 Lan9g1505 9 21628013 21633508 LSH