Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1471 ATGGAGGAATCAGCCACAAATTCTATCGTGTCGAAAGCGAGGAACGCCTTTCATTCCGCTGCTTCAAAAGCGGAGCGTGTTTTCAAATCTAATCAAGATCATGACAATAAGGATTTGATCACGCAACCGGAACTTGATTCTCCTCACAAACACAATCTCTCTAAGCTTCACAGTGAATTGAAGAACATAAAGTGGAGGACTCCACATATAGGAATTAAGCAGGATTTGCAAGAAAAAATTAAGAACATCCGGATAGGGAGAAAAGAAGTTCAAGATACAGATAAAGTTGGGGACGCAGACATGGCAATTCCATTTTATGATGAAAACTTGTTCATCCTAAATATGAAAAATGATCTTGAGGCCAAGGCTTCAGAAGCAATTCCCTTGGTTGAAAGCTTAACTGCTGCAAACGTAGACCTCATTCCTCCGTCTTCGGTACTGAAGCAATTGGCTATTTCTGTTGAGGCTGGAATTAAAACAAAGTCCATTAAAGATTTTATTGCTTCATCAGGAAGTTTTTCACCTGCCATAGAGAGGGCAGCCTCAACTCTTTCTGCGGTAAAGGCTTTAGTGCTGCGTGAAAAGGAGGAGAAACTAACCTCTGAGTTTAGTAGCGATGAGAGAGTTTTGCATCTGATTAGTTCTCTATTTGATCCAGAGGGAGATTTTCTCAAGAGGAAGATCAACTCCAATCCTGAGGAAACTGCCATAACATCTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTGGTTGTTAAACTAGCTGAAGTGATTGGGAACTTCAAGAATGTTCGGAAAATGGCACTTTTCTGGCGCAGATTTATTGTTGAACTAGGAAAACTTTGGTCTGAAGAACAACATTTACCTGGAGTCCCCACAGATGAGATCCCAGATCTGAAATCATGTCTTCTATATCAACAGTTTCAAGTAATTAATTGTTGCATCTCTCGGAAAAGGCTCCACATAATTGCAACCGAATCTCTTGAGTCTATGATGAAGGAAGCGGACACAAATATAAAACACTCAGATAATTATATTGATGGAAGTCCTGCAAGCCCTGTTCTATATGCTAGATTAAGTACTGGGGAGCTTGTTCTTCGAATTGGTGCAGATTGCCTGGCTGGAGATCTAATGTTGCTGGAAACAGGCGAGCCTGTGTACTCTCCTTTCACCCAGGAAGGACCTTTGCTTACAGAAGATCTAATCAGAGAACACGAGGAGTTTGTGCTGAGGACAGGGAGTGTTGGTGCTGGGTGCTCTCAACTCCTCTCTGATATGCAGGCTTTCAAGGCTGCAAATCCTGGAAGTATTTTGGAGGATTTTGTAAGGTGGCACTCTCCTCCTGATTGGTCAGAAAATGAGGCAATTACTGAGGATAGTGATGTTTTCTATCCTGGTGAGTTGTCTACCCGAGGTCAGCTAAGTCGACGAATGCAAAAAGAAGGTAATTTGTGGCGTCAATTGTGGGAAACTTCTAAACCAGTCCCTGCTGTTAAACAGGCACCTCTCTTTGATGAGGATTTGGCAGTGGAGGGTATTCTCAATGCATTTGAGGACATCCATCCTTCAGAGCTTTTTGGGCAGCTGTTTGTTTCTTTACTTGGTTTAGGATTTACAATTGCAGAACCTATGTTATCTGGTAACAATGACTTGTCAAAGTTGTTCTACGAGTGCAAAGAGTATGTAGTTGCAACATGCCAAAGCAACAGATGGTGCGAGAAAGTCCATGACCTTGTCAAGGTATATGAAACAGTGGAGACAATTTTACTGAATCCTGAGGAATCACTAAATATGATAAAGCAAACAGAAGAACCGAGCATGAGTACTGGAGAACCAAAAACCAGATTTAAGAGGCTGGGCCTTATATTCGGTGGCAAAGATATACTATTGAGAAAACCTGTATCAAATGATCAGATAAATGATGAAGACAAGTCAATTCGACAATCTTTGTCTAGTTTCTTCGAGAGCAAGTCATCTTTATTTTCAAAGAAGCTTCCCAAGTCTCGATGCCCATCTCCTCAGAAACCTAGTTCTCTCATAACTGATTGGACAACAGTTTAG 2067 0.4151 MEESATNSIVSKARNAFHSAASKAERVFKSNQDHDNKDLITQPELDSPHKHNLSKLHSELKNIKWRTPHIGIKQDLQEKIKNIRIGRKEVQDTDKVGDADMAIPFYDENLFILNMKNDLEAKASEAIPLVESLTAANVDLIPPSSVLKQLAISVEAGIKTKSIKDFIASSGSFSPAIERAASTLSAVKALVLREKEEKLTSEFSSDERVLHLISSLFDPEGDFLKRKINSNPEETAITSLPRDIHGAPPESLVVKLAEVIGNFKNVRKMALFWRRFIVELGKLWSEEQHLPGVPTDEIPDLKSCLLYQQFQVINCCISRKRLHIIATESLESMMKEADTNIKHSDNYIDGSPASPVLYARLSTGELVLRIGADCLAGDLMLLETGEPVYSPFTQEGPLLTEDLIREHEEFVLRTGSVGAGCSQLLSDMQAFKAANPGSILEDFVRWHSPPDWSENEAITEDSDVFYPGELSTRGQLSRRMQKEGNLWRQLWETSKPVPAVKQAPLFDEDLAVEGILNAFEDIHPSELFGQLFVSLLGLGFTIAEPMLSGNNDLSKLFYECKEYVVATCQSNRWCEKVHDLVKVYETVETILLNPEESLNMIKQTEEPSMSTGEPKTRFKRLGLIFGGKDILLRKPVSNDQINDEDKSIRQSLSSFFESKSSLFSKKLPKSRCPSPQKPSSLITDWTTV* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1471 688 Coils Coil 73 93 - -
Lan9g1471 688 MobiDBLite consensus disorder prediction 27 51 - -
Lan9g1471 688 Pfam Rab3 GTPase-activating protein catalytic subunit 369 520 IPR026147 -
Lan9g1471 688 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 6 687 - -
Lan9g1471 688 MobiDBLite consensus disorder prediction 665 688 - -
Lan9g1471 688 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 6 687 IPR045700 GO:0005096|GO:0043547
Lan9g1471 688 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1471 Lan-Chr9 21432437 21438566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1471 K18270 - gmx:100818643 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1316 2 24016862 24025226 Lan9g1471 9 21432437 21438566 LSH
Lan2g1316 2 24016862 24025226 Lan9g1471 9 21432437 21438566 PCT
Lan9g1471 9 21432437 21438566 Lan2g1316 2 24016862 24025226 PCT
Lan9g1471 9 21432437 21438566 Lan9g1471 9 21432437 21438566 PCT