Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1316 ATGGCGGAAGCGCCCACAAATTCTATTATGTGGAAAGCGAAGAGCGCCTTTCATTCCGCAGCTTCAAAAGCGGAACGTGTTTACAAATCTAATCAAGATCGTGAGAACAATAAGGAATTGAAGAATAACGGGATCACGCAACCGGAACAACTTGATTCTTCTCACAACCATAACTTTTCTAAGCTTCGCAGTGAACTGAAGTACATAAAGTGGAGTTCTCCACATACAGGAATAAAGCAGGATTGGCAAGCTAGAATTAAGAACATCCAGATAGGGAGAAAAGAAGTCAAAGATACAGATAAAGTTGGGGAGACAAACATGGCAATTCCATTTTATGATGAAAACTTGTTCATGCTGAATATGAAAAGTGATCTTGAGGCCAAGGCTTCAGAAGCAATTCCCTCAGTTGAACGCTTAACTGCTGCAACTAAAGACCCCATTCCTCCATCATCAGTACTGAAGCAATTGGCTATTGCTGTTGAGGCTGGAAGTAAAAAAAAGTCCATGAAAGATTTTATAGCTTCATCAGGAAGTTCTTCTCCTGCCATGGAGAGGGCTGCCTCAACTCTTTCTGCAGTAATGGCTTTAGTGTTGCGTGAAAAGGAGGACAAACTAACCTCTGACTTTAGTAGCAATGAGAGAGTTTTGCATCTGATTAGTTCTCTGTTTGATCCAGAGGGAGATTTTCTCAAAAGGAAGATCAACTCTGATCCTGAAGATCCTTCTATAGCATTTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTTGTTAAGCTAGCTGAAGTTATTGGAAGCTTCAAGACTGTTCGTAAGATGGCACTTTTCTGGCACAGAGTTATTGTTGAACTAAGAAAGCTTTGGTCTGAAGAACAACAATTACCTGGAGTCCCTCGGGATGCGATCCCAGATCTCAAGTCATGTCTTCTATACCAACAGTTTCAAGTAATTAATTGTTGCATTTCTCGGAAAAGGCTCCACATTATTGCAACCGAATCTCTAGAGTGTATGATGAAGGAAGCAAACTCAACTATAAAACACTCAGCTAAATATAATGATGGAAGTCCTGAAAGCCCTGTTCTATATGCTAGATTAAGTACCGGGGAGCTTGTTCTTCGAATTGGTGCAGATTGCCCGGCTGGAGATCTGACACTGTTGGAAACTGGCGAGCCTGTGTACTCTCCTTTCACCCAGGAAGGGCCTCTACTTACAGAAGATCTAATCAGAGAACACGAGGAGTTTGTGCTGAGGACAGGGAGTGTTGGTGCTGGGTGCTCTCAACTCCTCTCCGATATGCAGGCTTTCAAGGCTGCAAATCCTGGATGTATTTTGGAGGATTTTGTAAGGTGGCACTCTCCTCCTGATTGGTCAGAAAATGAAGCAATTACTGAGGATAGTGATGCTTTCTATGGTGGTGAGTTATCTACAAGAGGTCAGCTAAGTCTGCGAATGCGAAAGGAAGGTAATTTGTGGCGTCAATTGTGGGAAACTTCTAAACCAGTACCTGCTGTTAAACAGGCACCTCTATTTGATGAGGATTTGGCTGTGGAGGGTATTCTCAATGCATTTGAGGACATCCATCCTTTAGAGCTTTTTGGGCAGTTGTTTGTTTCTTTACTTGGTTTAGGATTTACAATTGCTGAACCTATGCTTTTGGGCAACAATGACTTGTCAAAGTTGTTCTACGACTGCAAAGAGTATGTAGTTGCCACATGTCAAAGCAGCAACTGGTGCGAGAAAGTCTATGACCTTGTTCAGGTATATGAAACAGTGGAGACAATTTTACTGAATCCTGAGGAATCACTAAAGATGATAAAGCAAACAGAAGAAGCAACCATGACTACTGGAGAACCAAAAGGCCGATTCAAGAGGCTCGGCCTTATATTTGGTGGCAAAGATATGCTATGGAGAAATCCTGTATCAAATGATCAGATAAATGATGAAGAAAAGTCAATTAGGCAATCTTTGTCTAAATTCTTTGATGGGAAGTCATCTCTATTTTCAAAGAATCCTCGTAAGTCTGGATGCCCATCTCCTTCTGAGAAACCTCCTTCTCTCCTAACTGATTGGACAATGGTTTAG 2088 0.4186 MAEAPTNSIMWKAKSAFHSAASKAERVYKSNQDRENNKELKNNGITQPEQLDSSHNHNFSKLRSELKYIKWSSPHTGIKQDWQARIKNIQIGRKEVKDTDKVGETNMAIPFYDENLFMLNMKSDLEAKASEAIPSVERLTAATKDPIPPSSVLKQLAIAVEAGSKKKSMKDFIASSGSSSPAMERAASTLSAVMALVLREKEDKLTSDFSSNERVLHLISSLFDPEGDFLKRKINSDPEDPSIAFLPRDIHGAPPESLVVKLAEVIGSFKTVRKMALFWHRVIVELRKLWSEEQQLPGVPRDAIPDLKSCLLYQQFQVINCCISRKRLHIIATESLECMMKEANSTIKHSAKYNDGSPESPVLYARLSTGELVLRIGADCPAGDLTLLETGEPVYSPFTQEGPLLTEDLIREHEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWSENEAITEDSDAFYGGELSTRGQLSLRMRKEGNLWRQLWETSKPVPAVKQAPLFDEDLAVEGILNAFEDIHPLELFGQLFVSLLGLGFTIAEPMLLGNNDLSKLFYDCKEYVVATCQSSNWCEKVYDLVQVYETVETILLNPEESLKMIKQTEEATMTTGEPKGRFKRLGLIFGGKDMLWRNPVSNDQINDEEKSIRQSLSKFFDGKSSLFSKNPRKSGCPSPSEKPPSLLTDWTMV* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1316 695 MobiDBLite consensus disorder prediction 665 695 - -
Lan2g1316 695 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 6 694 IPR045700 GO:0005096|GO:0043547
Lan2g1316 695 MobiDBLite consensus disorder prediction 24 56 - -
Lan2g1316 695 Pfam Rab3 GTPase-activating protein catalytic subunit 375 526 IPR026147 -
Lan2g1316 695 MobiDBLite consensus disorder prediction 41 55 - -
Lan2g1316 695 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 6 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1316 Lan-Chr2 24016862 24025226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1316 K18270 - gmx:100818643 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1316 2 24016862 24025226 Lan2g1316 2 24016862 24025226 ECH
Lan2g1316 2 24016862 24025226 Lan9g1471 9 21432437 21438566 LSH
Lan2g1316 2 24016862 24025226 Lan2g1316 2 24016862 24025226 PCT
Lan2g1316 2 24016862 24025226 Lan9g1471 9 21432437 21438566 PCT
Lan9g1471 9 21432437 21438566 Lan2g1316 2 24016862 24025226 PCT