Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1334 ATGGGCAATAGCATGGTCACACATAACAAGTACAAAAGTTTCATGTTCTTCATCAGAAAGTACAAGGTTACAGAGCTAGTTCCACCTCAGGATCTCAAGGAAGTGTTTTCCAAGTTCACCGGAGGAGGATCCCACATGTCGGCCGAGCAGTTCCGCCAGTTCCTGGTGGAGCATCAGGCCGAGAAAGACTGCACCTTATTGGATGCAGAGAAAATTGTTGAGAAGGTTTTGCAAATTAGAATAAGGCCTCAAGAGGAAACTATTAGTGTTGATGAAAACATTATAGACCAGAAAGTCACCCTTGATGACATCTTCTATTTTTTGCGTATGGATGATTTCAACAATCCCTTGAAATCTGAGGTACATCATGATATGAATGCTCCACTGTCACATTATTTCATATATGCAGGACATAATTCCTATCTCACTGGGAATCAACTGAGCAGTGATTGCAGTGAAAAGCCGATCATAAAGGCTTTGCAACGAGGCGTTCGAGCTATTGAGCTGGATTTGTGGCCAACTTTCAATAAAGATGATATTAAAGTAGTTCATGGATGGACTCTTACTACTCCAGTCTCAGCTATCAAATGTTTGGAGTCGATACGGGAATATGGTTTTGTTGCATCTCAGTACCCAATCATCATAACTATAGAAGACCACCTTACAAGAGATCTTCAAGCTAAATTTGCAGAAATGGCAACTCAAATATTTGGAGAAATGCTTTATTATCCGGAGACAGATCGTTTAACAGAATTCCCTTCACCAGAATCATTGAAAAATAGAGTAATTATATCCACCAAACCCCCAAAAGAATGTTTTGAACCCAATAGTATCAAGGATACTGACAACTTTCTTATGCTGAGTGGAAGTGGATCGTCATCATCATCATCATCAGAATCACAGGGAAAAGAATCACTGGACTCTATGACTGGAGTAAAGATTGAGGGCACTATGGCTGAAGTGAAGATTGAGGGCACGAATGAAAGTGATTGCGATGAGGGAGACATAAACACGTGGGAATGTGATCATAAATCATACCAGCGGTGTTCGCCCGAATACAAACGCTTAATTACAATCCATAATAAGAAACTCAAGGGTAGTCTGAAGGATAAATTGAAAATTGATGGTGAGCTAAGACGCTTAAGTTGGAGTGAGACGACCCTTGAAAAGGCTTCGGAATCTCACGGAGCAGACATTGTTAGGTTCACACAGAAAAATATCCTCCGGGTATACCCAAACTTAACGCGTGTCAAATCCACAAATTTCAAGCCACACATTGGGTGGATGTATGGGGCTCAGATGGTTGCATTCAATATGCAGGGTCATGCCAAACCACTCTGGTTGATGCAGGGGATGTTCAAGGCAAATGGAGGATGCGGTTATATAAAAAAGCCTCCGTGTCTGATGCAGGAACATCCATGCGATAAGGAATTTGATCCTAAAAGGAAACAGCCAGTGAAGAAGACATTAAAGGTAAAAGTATACATGGGACATGGCTGGAACATAGATTTCAGTCCTACACACTTTGATAAATTCTCTCCACCAGACTTTTTCACTAAGATTTGGATTGTTGGAGTGCCTGCTGATTATGCAAAGAAGAAAACAAAGGTAATCATTGATAACTGGTTTCCTGTTTGGGATGAAGAGTTTGAATTCCCCTTGACGGTTCCAGAGCTTGCTTTGCTTCGGATACAAGTTATAGACAAAGATCAAGGAAAGGGTGACTTTGGTGGGCAAACATGTTTGCCAGTGTCAGAGCTAAAACTTGGATTTCGTTCAGTCCCTTTGTATAACAAAAAAGGAGAGAAATTCAAATCTGTAAAGCTATTAATGCGGTTTCAGTTTGAATGA 1851 0.4079 MGNSMVTHNKYKSFMFFIRKYKVTELVPPQDLKEVFSKFTGGGSHMSAEQFRQFLVEHQAEKDCTLLDAEKIVEKVLQIRIRPQEETISVDENIIDQKVTLDDIFYFLRMDDFNNPLKSEVHHDMNAPLSHYFIYAGHNSYLTGNQLSSDCSEKPIIKALQRGVRAIELDLWPTFNKDDIKVVHGWTLTTPVSAIKCLESIREYGFVASQYPIIITIEDHLTRDLQAKFAEMATQIFGEMLYYPETDRLTEFPSPESLKNRVIISTKPPKECFEPNSIKDTDNFLMLSGSGSSSSSSSESQGKESLDSMTGVKIEGTMAEVKIEGTNESDCDEGDINTWECDHKSYQRCSPEYKRLITIHNKKLKGSLKDKLKIDGELRRLSWSETTLEKASESHGADIVRFTQKNILRVYPNLTRVKSTNFKPHIGWMYGAQMVAFNMQGHAKPLWLMQGMFKANGGCGYIKKPPCLMQEHPCDKEFDPKRKQPVKKTLKVKVYMGHGWNIDFSPTHFDKFSPPDFFTKIWIVGVPADYAKKKTKVIIDNWFPVWDEEFEFPLTVPELALLRIQVIDKDQGKGDFGGQTCLPVSELKLGFRSVPLYNKKGEKFKSVKLLMRFQFE* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1334 616 Gene3D C2 domain 483 616 IPR035892 -
Lan9g1334 616 SUPERFAMILY EF-hand 5 125 IPR011992 -
Lan9g1334 616 Pfam C2 domain 489 590 IPR000008 -
Lan9g1334 616 Gene3D Phosphatidylinositol (PI) phosphodiesterase 119 482 IPR017946 GO:0006629|GO:0008081
Lan9g1334 616 Pfam Phosphoinositide-specific phospholipase C, efhand-like 29 75 IPR015359 -
Lan9g1334 616 MobiDBLite consensus disorder prediction 289 311 - -
Lan9g1334 616 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 382 468 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lan9g1334 616 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 489 615 IPR035892 -
Lan9g1334 616 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 616 IPR001192 GO:0035556
Lan9g1334 616 CDD C2_PLC_like 487 616 - -
Lan9g1334 616 ProSiteProfiles C2 domain profile. 472 598 IPR000008 -
Lan9g1334 616 SUPERFAMILY PLC-like phosphodiesterases 123 470 IPR017946 GO:0006629|GO:0008081
Lan9g1334 616 SMART C2_3c 489 596 IPR000008 -
Lan9g1334 616 SMART plcx_3 123 267 IPR000909 -
Lan9g1334 616 Pfam Phosphatidylinositol-specific phospholipase C, X domain 125 267 IPR000909 -
Lan9g1334 616 SMART plcy_3 353 469 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lan9g1334 616 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 616 - -
Lan9g1334 616 PRINTS Phospholipase C signature 128 146 IPR001192 GO:0035556
Lan9g1334 616 PRINTS Phospholipase C signature 154 174 IPR001192 GO:0035556
Lan9g1334 616 PRINTS Phospholipase C signature 251 268 IPR001192 GO:0035556
Lan9g1334 616 PRINTS Phospholipase C signature 407 428 IPR001192 GO:0035556
Lan9g1334 616 PRINTS Phospholipase C signature 428 446 IPR001192 GO:0035556
Lan9g1334 616 PRINTS Phospholipase C signature 582 592 IPR001192 GO:0035556
Lan9g1334 616 MobiDBLite consensus disorder prediction 289 307 - -
Lan9g1334 616 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 123 267 - -
Lan9g1334 616 Gene3D - 24 117 - -
Lan9g1334 616 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 381 467 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1334 Lan-Chr9 20531368 20534770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1334 11 616 Acyl Lipid Metabolism Gene Families AT2G40116 54.952 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1334 K05857 - gmx:100820253 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0243 11 1550328 1556109 Lan9g1334 9 20531368 20534770 LSH
Lan14g0158 14 1966690 1972632 Lan9g1334 9 20531368 20534770 PCT
Lan9g1334 9 20531368 20534770 Lan14g0158 14 1966690 1972632 PCT