Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0243 ATGTCGAAACAGGCATACACTGTCTGCTTCTGCTTCAGCCGCCGCTTCAAACATGCCTTAGCGGAGGCGCCACCGGAGATCAACACCTTTTTCCAAAATTACTCTGAAAATGAGCTCATGACACCTTCTCAACTTCAAAGGTTCCTAGTTGAGGTTCAGAAACAGGAGAATGCCACCATAGAAGATGCTCAAGCCATCATCGATTCCCTCAAGCATTTCCATCGCAAGGGACTTAACAATGAAAGTTTCTTCAAGTATCTCCTCAGTGATAATAACCAACCACTTCCACCTTCTCTTGGGGTGCACAATGATATGACTTTACCCTTGTCGCATTATTTCATATATACCGGCCATAATTCCTATCTAACTGGAAATCAACTTAGTAGCGATTGTAGTGATGTCCCCATCATACGTGCTCTAAAGAGAGGTGTAAGGGTTATTGAATTGGACATATGGCCTAATGCATCAAAGGACAACGTGGATGTTCTTCATGGAAGGACATTGACTACTCCTGTGGAGCTTATAACATGTTTGAGGGCTATTAAGGAACATGCCTTTGAGACATCAGAATATCCAGTTGTAATAACCCTAGAAGACCACCTTACTCCAGATCTTCAGGCTAAAGTGGCTGAGATGGTTTCTCAAACATTTGGAGACACACTATTTTATCCAACTATAGAAAGCTTGAAGCAATTCCCTTCTCCTGAATCACTTAAGAAGAGGATTATTATATCAACCAAACCACCAAAGGAGTACCTTGAGGCAAAAGAAATAAAGGAAAAAGGGGAGGCTTCACAGCATGGAAAGGCTTCAGTGGATGAAGAAGCTTTAGGAAAAGAAGCTCTAAATATAGAACGTGGTACTATAGCTGATGTCAAGGATAACATTGTGGATGAAGAAGATCTTAATGATGATGATGATGAGGAAGATAGTGATGAATCAGATACTAAGTTACAAAATAATGGAGCACCAGAATATAGACGTCTAATTACAATTCATGCTGGAAAGCCTAAAGGTGGGTTACGTGAAAGCCTGAAAGTGGATGCTGATAAAGTGAGACGTGTAAGTTTAAGTGAGGGACAACTTGAAAAGGCTGTTATAACTCTTGGGAAAGAATTTGTCAGGTTTACTCAGGGGAATATAGTGAGGGTTTATCCAAAAGGTACTCGTATTACGTCTTCAAATTATAACCCATTACTTGGGTGGATGCATGGAGCACAAATGGTAGCACTTAACATGCAGGGTTATGGGAGATCACTTTGGTTGATGCAAGGAATGTTCAAAGCCAATGGTGGGTGTGGTTATGTTAAGAAACCTGATTTTCTATTAAAGACTGGTCCAAATAATGAGGTCTTCGATCCTAAAGCTAAGTTATCTGTGAAGACTACTTTGAAGGTAACTATATATATGGGGGAAGGATGGTACTATGATTTCAAGTCCACTCACTTCGATAAATACTCACCTCCAGACTTCTACACAAGAGTGGGGATAGCTGGAGTCGCAGATGATACTGTAATGAGAAAAACTAAGGTGATAGAGGATAATTGGTTGCCTAATTGGAATGAAGTGTTTGAGTTCACACTTACTGTTCCAGAATTGGCGCTGCTTGTGATACAAGTTCTTGAGTATGACATGTCTGATAAGGATGACTTTGGTGGACAAACAGTCCTACCTGTGTGGGAGCTAAGAAGTGGAATTCGTGCTGTTCCACTCTATAGCTACAAGGGAGAAAAATACAACTCTGTAAAGCTTCTTATGCGCTTCGAATTTAATTGA 1776 0.406 MSKQAYTVCFCFSRRFKHALAEAPPEINTFFQNYSENELMTPSQLQRFLVEVQKQENATIEDAQAIIDSLKHFHRKGLNNESFFKYLLSDNNQPLPPSLGVHNDMTLPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIRALKRGVRVIELDIWPNASKDNVDVLHGRTLTTPVELITCLRAIKEHAFETSEYPVVITLEDHLTPDLQAKVAEMVSQTFGDTLFYPTIESLKQFPSPESLKKRIIISTKPPKEYLEAKEIKEKGEASQHGKASVDEEALGKEALNIERGTIADVKDNIVDEEDLNDDDDEEDSDESDTKLQNNGAPEYRRLITIHAGKPKGGLRESLKVDADKVRRVSLSEGQLEKAVITLGKEFVRFTQGNIVRVYPKGTRITSSNYNPLLGWMHGAQMVALNMQGYGRSLWLMQGMFKANGGCGYVKKPDFLLKTGPNNEVFDPKAKLSVKTTLKVTIYMGEGWYYDFKSTHFDKYSPPDFYTRVGIAGVADDTVMRKTKVIEDNWLPNWNEVFEFTLTVPELALLVIQVLEYDMSDKDDFGGQTVLPVWELRSGIRAVPLYSYKGEKYNSVKLLMRFEFN* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0243 591 Pfam Phosphoinositide-specific phospholipase C, efhand-like 25 91 IPR015359 -
Lan11g0243 591 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 2 590 - -
Lan11g0243 591 Pfam Phosphatidylinositol-specific phospholipase C, X domain 105 247 IPR000909 -
Lan11g0243 591 CDD C2_PLC_like 461 590 - -
Lan11g0243 591 Pfam C2 domain 464 565 IPR000008 -
Lan11g0243 591 SMART plcx_3 103 247 IPR000909 -
Lan11g0243 591 MobiDBLite consensus disorder prediction 297 314 - -
Lan11g0243 591 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 354 441 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lan11g0243 591 Gene3D Phosphatidylinositol (PI) phosphodiesterase 99 456 IPR017946 GO:0006629|GO:0008081
Lan11g0243 591 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 463 590 IPR035892 -
Lan11g0243 591 PRINTS Phospholipase C signature 108 126 IPR001192 GO:0035556
Lan11g0243 591 PRINTS Phospholipase C signature 134 154 IPR001192 GO:0035556
Lan11g0243 591 PRINTS Phospholipase C signature 231 248 IPR001192 GO:0035556
Lan11g0243 591 PRINTS Phospholipase C signature 381 402 IPR001192 GO:0035556
Lan11g0243 591 PRINTS Phospholipase C signature 402 420 IPR001192 GO:0035556
Lan11g0243 591 PRINTS Phospholipase C signature 557 567 IPR001192 GO:0035556
Lan11g0243 591 MobiDBLite consensus disorder prediction 293 327 - -
Lan11g0243 591 Gene3D C2 domain 457 591 IPR035892 -
Lan11g0243 591 ProSiteProfiles C2 domain profile. 444 573 IPR000008 -
Lan11g0243 591 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 590 IPR001192 GO:0035556
Lan11g0243 591 SUPERFAMILY PLC-like phosphodiesterases 103 444 IPR017946 GO:0006629|GO:0008081
Lan11g0243 591 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 103 247 - -
Lan11g0243 591 SUPERFAMILY EF-hand 14 98 IPR011992 -
Lan11g0243 591 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 356 442 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lan11g0243 591 SMART C2_3c 463 571 IPR000008 -
Lan11g0243 591 Gene3D - 20 98 - -
Lan11g0243 591 SMART plcy_3 326 443 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0243 Lan-Chr11 1550328 1556109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0243 1 590 Acyl Lipid Metabolism Gene Families AT3G55940 65.829 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0243 K05857 - gmx:100037460 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0243 11 1550328 1556109 Lan11g0243 11 1550328 1556109 ECH
Lan11g0243 11 1550328 1556109 Lan9g1334 9 20531368 20534770 LSH
Lan14g0158 14 1966690 1972632 Lan11g0243 11 1550328 1556109 PCT
Lan11g0243 11 1550328 1556109 Lan14g0158 14 1966690 1972632 PCT