Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1292 ATGTTAAGCCTAGGTGAAACAGTAATGAATCACCACTCTAGCAAGGATACTGATACAAGTGCACCTCAGGTAAACTGGTGGTATGTAGATGAATCTTATGAAGAACTCAAAAAGGGAAACCAAAATGTGAGAATCTCCGATGAGACATTCACTTGTCCGTACTGCCCTAGAAGAAAACAGGACTATGTGTACAGGGAACTCCTTGAACATGCTTCTGGGGTGGGTCGTAGTAGTTCACTGAAGAAAAGTGCCAGAGAAAGGGCTAATCATCTAGCTTTAGTGAAATATTTGGAGAAGGATCTTATTAGCATGGAAGGCCCTACCCCATTTAAACCTGTAGATAAAGGTATCAAAATATTAAGCTCAGAAGAAACGGTAAAATGTCATAGCTCTAACATGGATACTGATAGAAGTGCATCTCAATCCCAAATAAGTGGGTTGTATGTGAAGAAATTTTATAAACAACTCAAAACGGGAAGTCTCAATGTCAAAACCTCAGATGAAACATTCACTTGTCCGTTCTGCCCTAAAAAGATAAAACGGGATTATGTGTACAGGGAAATCCTTGCACATGCTTCTGGGGTGGGTCAAAGTAATTCACAAAAGAGAAGTCACTGGGAAAAGGCTTCTCATCTGGCTTTAATGAAATATTTGGAAAAGGATCTTATGAATGTTGATGGTCCATCAAAACCTGTAGATAAAGGTACAATAATATTAAGCCCACCAGAAACTGTAGTAGGTCAGTGCTGTGACAAAGATACTGGTATAAATGCATCTCAAATAATCTGGAGGTCTGTACGTAAATCTTATGAAGAACTCAGAAAAGGAAGCCACACTGTCAAAACCTCTGATTTGACTTTCACGTGTCCATACTGCCCTAAAAGGATAAAACGGGATTATGTGTACAGGGAAATCCTTGAACATGCTTCAGGGGTGGGTTACAGTACTTCACAAAAGAGAAGTGCCACTGAAAAGGCCAATCATATAGCTTTAGTGAAATATTTGAAAAAGGATCTCATGAATGAGGATGGTCCATCAAAACCTGTAGATAAAGGTACCATAATATCACACGCCGGTGATACTGTCATGAGCCACTGCTCTGTCATGTATACTAATACAAGTGCAAATCAAATAAGTGTAAATCATGTGGATAAACGTTATGAAGAACTTAAAAAGGGAAGTCTCAATGTGAGAACCTCAGATGAGACTTTCACATGTCCTTACTGCCCTAAAAAGAGAAAACGAGAGTATGTGTTCAGGGAAATCCTTGAACATGCTTCCGGGGTTTGCCAGAGTAGCTCACAAAAGAGAAGTGCCACTGAAAAGGCCAATCATATGGCTTTAGTGAAATATTTGAAAAAGGATCTTATGGATGTGGGTGGTCCATCAAAACGTAGGTATGAAGGCACTTTTGTTTATTCTGATGACCAGTTTGTTTGGCCTTGGACTGGGATTGTGGTTAATATTCCCTCTAAACAGTCAGAAGATGGACATTGCGTTGGGAAAAGCAGTTCCAAGCTGAGGGATGAGTACAGAATTAGGGGTTTTAATCCACAAAGAGTCCGCCCTCTTTGGGACCTCCAGGGTCACTCTGGAGCAGCACTTGTGGAATTCGATAAAAAATGGTCAGGGTTGGATAAGGCATTGAAATTTGAAAAAGCATATGAATCAGATCATCATGGGAAAATGGACTGGTTTTCTAATACTATTCAGAAGTCTGGTCTTTATGCATGGATTGCCCGAGCAGATGACTACAACATGAACAATATCATCGGGGAACAACTGCAGAAGATGGGAGATCTCAAAACAATATCTGAACTTATGGAAGGAGAAGCTCGAATGCATGATAAACTTGTGTCCAGTCTGATAAACACTATTCAGGTCAAGAACAGTCACTTGAAGGATATGGAAATACGATACAATGAGACTACACTTCGCGTGGACACTGTAATGGGGGAAATAGACAAGCTCGCTCAATCTCATAATCAAGAAATGAAGAAAATACAGTCAAGTGCAAGGCAATACGTTCAGAGTATTTTTAACAGTCATGAAAGGCATAAGTTGCAATTGGAGTCTCAGAACAGCAAGCTTGAGTTGCGGAGGATTGAATTGGAAAAACGTGAGGCACATAATGAAATTCAGAGGAAAAAGTTGCTAGAAGAGATTGATGAGAATGCAAACAGCTCTCTTCAAATGGCTGTTCTGGAGCACCACAAGGCTAAGGAAAATGTTTTTAAACTGGCTGCTGATCAAAAGCGGCAAAAAGAGCAACTCCATGCTAAAATCACCCAGCTTGAAAAACAATTGGATATGAAACAAAAACTGGAAATGGAGATTCTACAACTAAAAGGAAAATTAAACGCCATGAAGCACATGCAAGATGATGGAGATTTAGAAGTTCTGAATAAGTTGGATGCTTTACAGAAGGATTTAAGAGAAAAGGAACTGTCACTTCAAGAGTTAGATGCATTGAATCAGACACTGATCATTAAAGAGCGTAAGAGCAATGATGAGCTGCAGGAAGCCCGAAAAGAATTGATTAACAGCATTAAAGATATGTCTATTCGTGCCACTGCCAATATTGGTGTGAAGAGAATGGGGGAACTTGATACTAGACCATTTGTTGAAACTATGAAGAAAACATATAATGAGGAGGACGCAGAAGAGAGAGCTTCAGAACTGTGTTCATTGTGGGAAGAGTATCTAAAAGACCCGGACTGGCATCCATTTAAAATTACCATGATTAATGGGAAACATCAGGAAATCATAGATGATGAAGATGAAAAGCTGAAGGGACTGAAAAATGAGATGGGTGAGGGAGTGTACAAAGCTGTTGTTGCAGCATTGAGAGAGATAAATGAATATAATCCAAGTGGGCGCTATATATTCTCAGAATTATGGAACTATGAAGAGGGAAGGAAAGCAACTTTGCAAGAAGGAGTGCAAGTTCTGTTGAAGCAATGGAAAGTGCAGAAACGTGAGAGGTGA 2988 0.3973 MLSLGETVMNHHSSKDTDTSAPQVNWWYVDESYEELKKGNQNVRISDETFTCPYCPRRKQDYVYRELLEHASGVGRSSSLKKSARERANHLALVKYLEKDLISMEGPTPFKPVDKGIKILSSEETVKCHSSNMDTDRSASQSQISGLYVKKFYKQLKTGSLNVKTSDETFTCPFCPKKIKRDYVYREILAHASGVGQSNSQKRSHWEKASHLALMKYLEKDLMNVDGPSKPVDKGTIILSPPETVVGQCCDKDTGINASQIIWRSVRKSYEELRKGSHTVKTSDLTFTCPYCPKRIKRDYVYREILEHASGVGYSTSQKRSATEKANHIALVKYLKKDLMNEDGPSKPVDKGTIISHAGDTVMSHCSVMYTNTSANQISVNHVDKRYEELKKGSLNVRTSDETFTCPYCPKKRKREYVFREILEHASGVCQSSSQKRSATEKANHMALVKYLKKDLMDVGGPSKRRYEGTFVYSDDQFVWPWTGIVVNIPSKQSEDGHCVGKSSSKLRDEYRIRGFNPQRVRPLWDLQGHSGAALVEFDKKWSGLDKALKFEKAYESDHHGKMDWFSNTIQKSGLYAWIARADDYNMNNIIGEQLQKMGDLKTISELMEGEARMHDKLVSSLINTIQVKNSHLKDMEIRYNETTLRVDTVMGEIDKLAQSHNQEMKKIQSSARQYVQSIFNSHERHKLQLESQNSKLELRRIELEKREAHNEIQRKKLLEEIDENANSSLQMAVLEHHKAKENVFKLAADQKRQKEQLHAKITQLEKQLDMKQKLEMEILQLKGKLNAMKHMQDDGDLEVLNKLDALQKDLREKELSLQELDALNQTLIIKERKSNDELQEARKELINSIKDMSIRATANIGVKRMGELDTRPFVETMKKTYNEEDAEERASELCSLWEEYLKDPDWHPFKITMINGKHQEIIDDEDEKLKGLKNEMGEGVYKAVVAALREINEYNPSGRYIFSELWNYEEGRKATLQEGVQVLLKQWKVQKRER* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1292 995 Coils Coil 685 719 - -
Lan9g1292 995 Coils Coil 748 792 - -
Lan9g1292 995 PANTHER RIBONUCLEASE P SUBUNIT P38 58 123 IPR045177 GO:0080188
Lan9g1292 995 PANTHER RIBONUCLEASE P SUBUNIT P38 128 178 IPR045177 GO:0080188
Lan9g1292 995 PANTHER RIBONUCLEASE P SUBUNIT P38 9 59 IPR045177 GO:0080188
Lan9g1292 995 PANTHER RIBONUCLEASE P SUBUNIT P38 297 352 IPR045177 GO:0080188
Lan9g1292 995 PANTHER RIBONUCLEASE P SUBUNIT P38 412 995 IPR045177 GO:0080188
Lan9g1292 995 PANTHER RIBONUCLEASE P SUBUNIT P38 248 296 IPR045177 GO:0080188
Lan9g1292 995 PANTHER RIBONUCLEASE P SUBUNIT P38 363 412 IPR045177 GO:0080188
Lan9g1292 995 PANTHER RIBONUCLEASE P SUBUNIT P38 180 235 IPR045177 GO:0080188
Lan9g1292 995 CDD RRM_like_XS 478 585 IPR005380 GO:0031047
Lan9g1292 995 Coils Coil 916 936 - -
Lan9g1292 995 Pfam XS domain 475 586 IPR005380 GO:0031047
Lan9g1292 995 Coils Coil 804 856 - -
Lan9g1292 995 Pfam XS zinc finger domain 289 332 IPR005381 GO:0031047
Lan9g1292 995 Pfam XS zinc finger domain 406 449 IPR005381 GO:0031047
Lan9g1292 995 Pfam XS zinc finger domain 52 94 IPR005381 GO:0031047
Lan9g1292 995 Pfam XS zinc finger domain 172 214 IPR005381 GO:0031047
Lan9g1292 995 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 412 995 - -
Lan9g1292 995 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 297 352 - -
Lan9g1292 995 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 180 235 - -
Lan9g1292 995 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 9 59 - -
Lan9g1292 995 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 248 296 - -
Lan9g1292 995 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 363 412 - -
Lan9g1292 995 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 128 178 - -
Lan9g1292 995 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 58 123 - -
Lan9g1292 995 Pfam XH domain 864 993 IPR005379 -
Lan9g1292 995 Gene3D XS domain 472 640 IPR038588 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1292 Lan-Chr9 20214630 20224505 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1292 - - gmx:100790814 1338.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0188 4 3161154 3162740 Lan9g1292 9 20214630 20224505 PCT
Lan16g0640 16 8188188 8193262 Lan9g1292 9 20214630 20224505 PCT
Lan9g1292 9 20214630 20224505 Lan4g0188 4 3161154 3162740 PCT
Lan9g1292 9 20214630 20224505 Lan16g0640 16 8188188 8193262 PCT