Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0188 ATGGATCACAGCTCTGACGAGGATACTAATATTAGTGAATCTAAAATAAGTGACTATGAAGACAAGTCTTATGAGAAACTGAAAAATGGAAGTCATTGTGTTAAAACCTCGGACGAGACCTTCACTTGTCCATACTACCCTAAAAAGAGAAAACGAGATTATATGTACAATAAGCTCCTTCAACATGCTTCTAGGGTTGGCCAGAGTAGTTCACAAAAGAGAAGAACAATAGACAAGGCTAACCATATGGCTTTACTGAAATATTTGGAAAAAGATCTTATGAAGGTTAATGTTCTGGCAAAACCTGCGGATGAAAGCGATTCTTTTGTTAATCCTAATGAACAATTTGTGTGGCCTTGGATTAGAATTGTTGTCAATATTCCCACTAAAAGGGCCGGAGATGGACATTTTATTGGGGAAAGTGGTTCAAAATTGAGGGACGAGTACAAATGTATGGGGTTTGATCCTTTGAGAGTTAGTCCCCTTTGGAATTTCCGAGGTCACACTGGAACTGCTCTTGTAGAATTCAATAAAAATTGGTCATGGTTCCATAATGCATTGACATTTGAAAAAAACATATGA 582 0.3729 MDHSSDEDTNISESKISDYEDKSYEKLKNGSHCVKTSDETFTCPYYPKKRKRDYMYNKLLQHASRVGQSSSQKRRTIDKANHMALLKYLEKDLMKVNVLAKPADESDSFVNPNEQFVWPWIRIVVNIPTKRAGDGHFIGESGSKLRDEYKCMGFDPLRVSPLWNFRGHTGTALVEFNKNWSWFHNALTFEKNI* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0188 193 Gene3D XS domain 110 192 IPR038588 -
Lan4g0188 193 Pfam XS domain 114 192 IPR005380 GO:0031047
Lan4g0188 193 PANTHER RIBONUCLEASE P SUBUNIT P38 1 49 IPR045177 GO:0080188
Lan4g0188 193 PANTHER RIBONUCLEASE P SUBUNIT P38 49 191 IPR045177 GO:0080188
Lan4g0188 193 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
Lan4g0188 193 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 49 191 - -
Lan4g0188 193 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0188 Lan-Chr4 3161154 3162740 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0188 - - lang:109344544 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0188 4 3161154 3162740 Lan16g0640 16 8188188 8193262 LSH
Lan4g0188 4 3161154 3162740 Lan9g1292 9 20214630 20224505 PCT
Lan9g1292 9 20214630 20224505 Lan4g0188 4 3161154 3162740 PCT