Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1277 ATGGAGGCTTTTGTTTCCCAAGATAAAGTTGTGGCAATGGTTTCTCGGACAGGTAGAGAGTTGCAGCGTTACAGAAAAGGACGACGCCAAGTAGTGGGATGCATACCATACAGATATAAAAATGATGTGCAAACCTCATTGGAGTCATTAGAAGAATTACAAGTATTGATAATTACTTCTAAGAAAGGCAAAGCCATGCTGTTTCCAAAGGGTGGCTGGGAGTTAGATGAATCAAAAAAGGAGGCAGCAGTGCGAGAAACCATAGAGGAAGCAGGCGTGCGAGGCATTGTTGAGGAAAAATTGGGTAAGTGGAGCTTCAAAAGCAAAACCTATGACACTTTCTACGAAGGCTACATGTTCCCTCTACTTGTTCAAGATCAATTAGAGTTCTGGCCGGAGCAGCATGTTCGTCAGAGAATATGGATGAGCATTTCTGAAGCAAAAGAAGTTTGTCAACACTGGTGGATGAAAGAAGCTTTGGAAAGACTAGTAAATCGTCTCACGGCTCAAAAATATGGTCGTGTAAAACAAGTTGTAGGTTCTGTACACAGCATAGAAGATGGCAAATTTGACTTGTCAATGGGGTAG 588 0.4218 MEAFVSQDKVVAMVSRTGRELQRYRKGRRQVVGCIPYRYKNDVQTSLESLEELQVLIITSKKGKAMLFPKGGWELDESKKEAAVRETIEEAGVRGIVEEKLGKWSFKSKTYDTFYEGYMFPLLVQDQLEFWPEQHVRQRIWMSISEAKEVCQHWWMKEALERLVNRLTAQKYGRVKQVVGSVHSIEDGKFDLSMG* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1277 195 Pfam NUDIX domain 54 162 IPR000086 -
Lan9g1277 195 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 13 167 - -
Lan9g1277 195 SUPERFAMILY Nudix 18 166 IPR015797 -
Lan9g1277 195 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 9 178 - -
Lan9g1277 195 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Lan9g1277 195 CDD Nudix_Hydrolase_9 30 157 - -
Lan9g1277 195 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 9 178 - -
Lan9g1277 195 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1277 Lan-Chr9 19986624 19988299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1277 K07766 - gmx:100798559 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0205 4 3428892 3431463 Lan9g1277 9 19986624 19988299 PCT
Lan16g0611 16 7542558 7545237 Lan9g1277 9 19986624 19988299 PCT
Lan9g1277 9 19986624 19988299 Lan4g0205 4 3428892 3431463 PCT
Lan9g1277 9 19986624 19988299 Lan16g0611 16 7542558 7545237 PCT