Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0611 ATGGTTGCTTTGGTTTCTCAAGATAATGTTGTGTCATTGGTTTCTCGTACTGGTAGGGAATTACAACGTTACAGAAAAGGTCGTCGCCAAGTTGTGGGATGCATACCATACAGATATAAAATAGGGGAGAAAACTTCCATGGACAGTGATGAAATTGAAGTTCTGGTTATTAGTTCTCAGAATCAGAAAGGAAAAGGGATGCTTTTTCCAAAGGGAGGTTGGGAATTAGACGAATCTAAAAAGGAGGCAGCTTTGAGAGAAACCATAGAAGAAGCTGGAGTTCGAGGCATTGTTGGGGGTAAATTGGGTAAATGGAGTTTCAAGAGCAAGACACATGATACTTTCTATGAAGGATACATGTTCCCTCTACTTGTTCAAGAGCAGCTAGAATTCTGGCCAGAGCATAATGTTCGTCAAAGAACATGGATGAGCGTAAGTGAAGCAAGAGAAGCTTGTCAACGCTGGTGGATGAAAGAAGCACTAGACAGACTCGTAAACCGTCTATCAGGTTCAAAACTTGGTGGCGAAAAACAAGTTCTGCCCTCTCTAAACTGCATAGGAGATGCCAGATCTGCTTTGTAG 582 0.421 MVALVSQDNVVSLVSRTGRELQRYRKGRRQVVGCIPYRYKIGEKTSMDSDEIEVLVISSQNQKGKGMLFPKGGWELDESKKEAALRETIEEAGVRGIVGGKLGKWSFKSKTHDTFYEGYMFPLLVQEQLEFWPEHNVRQRTWMSVSEAREACQRWWMKEALDRLVNRLSGSKLGGEKQVLPSLNCIGDARSAL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0611 193 CDD Nudix_Hydrolase_9 30 158 - -
Lan16g0611 193 ProSitePatterns Nudix box signature. 72 93 IPR020084 GO:0016787
Lan16g0611 193 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 167 - -
Lan16g0611 193 Pfam NUDIX domain 51 163 IPR000086 -
Lan16g0611 193 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 188 - -
Lan16g0611 193 SUPERFAMILY Nudix 22 168 IPR015797 -
Lan16g0611 193 ProSiteProfiles Nudix hydrolase domain profile. 27 165 IPR000086 -
Lan16g0611 193 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0611 Lan-Chr16 7542558 7545237 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0611 K07766 - gmx:100795999 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0205 4 3428892 3431463 Lan16g0611 16 7542558 7545237 LSH
Lan16g0611 16 7542558 7545237 Lan9g1277 9 19986624 19988299 PCT
Lan9g1277 9 19986624 19988299 Lan16g0611 16 7542558 7545237 PCT