Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1033 ATGGACCTCCCTACCCATCAATTCTTTCAACCTCCACCTCCTATTGAGAGCAACATGAACTTGTATGGTAAGAACAAAAACAACCCTTTTGAGGATGATTTCCCTGATCCACTTTGCAAGCTCAATCTCAAAGAAACCTCAGAATTTGTCAAGTCATTTCCAATACCAAATGCTAATGCAGAAACCAACAACAACAACACTGTCACACAACAACATAGGAGACTAGAGGCTCCTTCAACTCCTGGTAGACCTGTTTTCAGCTTCACAAATGTAGGACTTGGAAGAAACCTTTCAAGAAAAAACTTCCCTTCAAAATGGGATGATGCAGAGAAATGGCTCATGAGTACTACAACCTCCTCATTCTGCCATGACTCACCAGCTCATGTGAATCTGTCACTATCAGAGTCCTCAAAGAACAGCAGAAGCAGTAGCAGACAGTGTGATAACTTTAAACAGCAAGTGGAGAACAAGGTCATAGTCAATGGAGAAAGGGTGTCCAAAACTGTCCCAAGTTTCCAAAGGTCTGCATCTTTGGACCACTATAACCCATTTGGTGCTTTCAATGGAGTGGTCTCAGCATCTTCAACAGACCACATGCTACTAAAAGATAAATTCACAGATACCATAGAGCCTATCTTGCCAAATTCCAGATATTTAGAACCAACTAAAGAAGTGTTCTTGTTCCGAAACCCGGCCAGAGAGGCAATGAAAGATGCATGCACAGAAGTGATTCATGATCTTCAGCATAAAGATGCTGGAACAGAAATGACTCCTCTTGGAAGCTCCACTAATTCAAGGTGCCACACACCAATCAAAAGTTCATCGCCGGCTCGCCATAACACTCCTGCAAGTATGTCAGGACTATTGGCCTTGCCAAACCCCAATGGAACTAGCTGCACTCTTGACCTTATTCAGCTAGAGGAATGTCATTTCTCTAAACTCAAACTAGGAGCACAATATGATTTTGTCACTTCAAATTGGAGCACAAGTGATGAGGATGAAGAGGAAATATCAAAGAGCTTGAGACATAATTCTAGCCAGAAAGCTGATTCAGAATGTAGAGCTGCTACATGGGAAGAAGAGGAGAAGAACAAGTGCTGTCTTAGGTATCAGAGGGAAGAAGCAAAAATCCAAGCTTGGGTAAACCTTCAAAATGCTAAAGCAGAAGCACATTCAAGAAAGCTAGAGGTGAAGATACAAAAGATGAGATCAAACTTGGAAGAGAAGTTGATGAAGAGAATGTCAATAGTTCACAGAAAAGCTGAGGAATGGAGAACAAATGCTAGACAACAACACTTGGAGCAAATCCAAAAGGCCACTGAACAAGCTCAAAAGATGATTCACAAGCATAACACACATTTTACAAGACACAGTTCATGTGGTTGCTTCCCTTTCAATAACAACTATCATTAA 1413 0.4133 MDLPTHQFFQPPPPIESNMNLYGKNKNNPFEDDFPDPLCKLNLKETSEFVKSFPIPNANAETNNNNTVTQQHRRLEAPSTPGRPVFSFTNVGLGRNLSRKNFPSKWDDAEKWLMSTTTSSFCHDSPAHVNLSLSESSKNSRSSSRQCDNFKQQVENKVIVNGERVSKTVPSFQRSASLDHYNPFGAFNGVVSASSTDHMLLKDKFTDTIEPILPNSRYLEPTKEVFLFRNPAREAMKDACTEVIHDLQHKDAGTEMTPLGSSTNSRCHTPIKSSSPARHNTPASMSGLLALPNPNGTSCTLDLIQLEECHFSKLKLGAQYDFVTSNWSTSDEDEEEISKSLRHNSSQKADSECRAATWEEEEKNKCCLRYQREEAKIQAWVNLQNAKAEAHSRKLEVKIQKMRSNLEEKLMKRMSIVHRKAEEWRTNARQQHLEQIQKATEQAQKMIHKHNTHFTRHSSCGCFPFNNNYH* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1033 470 Coils Coil 429 449 - -
Lan9g1033 470 PANTHER OS11G0616300 PROTEIN 13 466 - -
Lan9g1033 470 Pfam Remorin, C-terminal region 352 451 IPR005516 -
Lan9g1033 470 PANTHER OS02G0116800 PROTEIN 13 466 - -
Lan9g1033 470 Coils Coil 385 412 - -
Lan9g1033 470 MobiDBLite consensus disorder prediction 255 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1033 Lan-Chr9 17574602 17579145 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1033 - - aip:107624762 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0585 11 4663793 4667415 Lan9g1033 9 17574602 17579145 LSH
Lan9g1033 9 17574602 17579145 Lan2g0867 2 19011546 19017781 LSH
Lan16g1125 16 18332586 18337623 Lan9g1033 9 17574602 17579145 PCT
Lan9g1033 9 17574602 17579145 Lan16g1125 16 18332586 18337623 PCT