Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0585 ATGGATCATCCCAGCCATAAATTCTTTCAATCTCCACTTGCTTTAACAACACATATGGATTCAACCTTTGAGAGCAACATGGGGTTGTATGGGAAAAACAAAAACAACCCTTTTGGAGATGATTTCCCTGATCCACTTTGCAAGCTCAATCTCAAAGAAACTTCAGAATTTGTCAAGTCATTTCCAATACCAAATGCTAATGCACAAACCAACAACAACAACAACAATGTCACACAACATCATAGGAGACTAGAGGCACCTTCAACTCCTGGTAGACCTGTTTTCAACTTCACTTCTAATGATGGACTTAGAAGAAACCTTTCAAGAAAGAACTTCCCTTCAAAATGGGATGATGCAGAGAAATGGGTCATGAACACTACAACTTCCACTTCATGCCATGACTCACCAGCTCTTATGAAGCTGTCACTGTCAGAGTCCTCATCAAAGAACAGCAGAAGCAGTAGCAAACAATGTGATACCATGAAGCAGCAAATGGAGAATAGGGTTACAGTGAATGAAGAAGTGGTGTCCAAACATGTCCCAAGCTTCCAAAGGTCTGCATCTTTGGACCACTACAACCCATTTGGTGCAACAGACCACATGGTACTGAAAGATAAGTTCACAAATAGCATTGAGCCTATAATCCCAAATTTTAGACACTCAGAACCCACTAAAAAAGGGTTCTTGTTTAGAAATTCAGCTGGGGAAGCTATGCAAGATGCAAGCACAGAAGTAATTCATGATGTTCAACATAAAGATGTTGGGACTGAAATGACTCCTCTTGGAAGTTCTACTACTTCAAGGTGCCACACACCGATCAAGAGTTCATCGCCGGCACGCCACAACACTCCTGCTAGTAGGTCAGGACTATTGGCCTTGGCAAACCCCAATGGCACTAGCTGCAATGTTGATGTTATTAATCTGGAGTGCCATTTCTCTAACCTAAAACTAGGGACACAATGTGATTTAGTCACTTCAAATTGGAGCACAAGTGAAGAGGAGGAAGAGGAAATATCAAAGAGTTTGAGGCATAATTCTAGTCAGAAAGCTGATTCAGAATGTAGAGCTGCTACATGGGAAGAAGAAGAGAAGAATAAGTGCTGTCTGAGGTATCAGAGGGAAGAAGCAAAAATCCAAGCTTGGGTAAACCTCCAAAATGCTAAAGCAGAATCTCAGTCAAGAAAGCTTGAGGTGAAAATAGAAAAGATGAGATCAAACCTGGAAGAGAAGTTGATGAAGAGAATGTCAGTGGTTCACAGAAAAGCAGAGGAATGGAGATCAACAGCTACACAACAACATTTAGAGCAAATTGAAAAGGCCACTGAACAAGCTCAAAAGATGATAAATAAGCATAACACACATTTTTCAAGGCACATCTCATGTGGTTGCTTCCCTTGCAATACCAACCATCACTAA 1416 0.4096 MDHPSHKFFQSPLALTTHMDSTFESNMGLYGKNKNNPFGDDFPDPLCKLNLKETSEFVKSFPIPNANAQTNNNNNNVTQHHRRLEAPSTPGRPVFNFTSNDGLRRNLSRKNFPSKWDDAEKWVMNTTTSTSCHDSPALMKLSLSESSSKNSRSSSKQCDTMKQQMENRVTVNEEVVSKHVPSFQRSASLDHYNPFGATDHMVLKDKFTNSIEPIIPNFRHSEPTKKGFLFRNSAGEAMQDASTEVIHDVQHKDVGTEMTPLGSSTTSRCHTPIKSSSPARHNTPASRSGLLALANPNGTSCNVDVINLECHFSNLKLGTQCDLVTSNWSTSEEEEEEISKSLRHNSSQKADSECRAATWEEEEKNKCCLRYQREEAKIQAWVNLQNAKAESQSRKLEVKIEKMRSNLEEKLMKRMSVVHRKAEEWRSTATQQHLEQIEKATEQAQKMINKHNTHFSRHISCGCFPCNTNHH* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0585 471 MobiDBLite consensus disorder prediction 257 285 - -
Lan11g0585 471 PANTHER OS11G0616300 PROTEIN 1 467 - -
Lan11g0585 471 Pfam Remorin, C-terminal region 353 452 IPR005516 -
Lan11g0585 471 Coils Coil 386 413 - -
Lan11g0585 471 MobiDBLite consensus disorder prediction 142 161 - -
Lan11g0585 471 PANTHER OS02G0116800 PROTEIN 1 467 - -
Lan11g0585 471 Coils Coil 430 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0585 Lan-Chr11 4663793 4667415 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0585 - - gmx:100819894 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0585 11 4663793 4667415 Lan9g1033 9 17574602 17579145 LSH
Lan11g0585 11 4663793 4667415 Lan2g0867 2 19011546 19017781 LSH
Lan16g1125 16 18332586 18337623 Lan11g0585 11 4663793 4667415 PCT
Lan11g0585 11 4663793 4667415 Lan16g1125 16 18332586 18337623 PCT