Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0969 ATGCTCTCCCTTTTTTCTTTCTGTTTTCTGAAAAGCTTCAGCTTAAGTACTTCGAAGATGTTGGAGAAAGTGGAAGCGTTCAACATGGACAAAGTGATAGAGGAATTTGAGGCAGTGACAAAGGATGCTGAGAGGGTTCAGAGGGAAACACTGAAAAGGATTTTGGAAGATAACGCATCAGCAGAATACTTGCTGAGTTTAGGGCTCAATGGAAGGACTGACCCTGAGAGTTTCAAGACATGTATCCCAGTGGTCAGACACAAGGACTTGGAGCCTTATATTAACAGAATGATTTATGGAGATTATTCTTCTATTCTCACTGGAAAACCCATCACAAACATGTCTTTAAGTTCTGGCACTACTTCTGGCAAGCCAAAATATGTACCATGGAGTGATGAATTGTTTGAAACCACTATGCAGATATATCAGACCTCTTTTTCATTTAGGAACAGAGAGTTCCCCATAAAAAATGGCAAGGCCTTAAGCTTCATCTATAGCAGCAAGCATTTCAAAACAGAAGGGGGTCTAGCTGCAGGCACTGCAACGACGAATTTGTTCCGCGACAAACGTTACAAGCAAGCAATGGCAGCACTTCAGTCACAATGTTGCAGCCCTGAGGAAGTAATATTTGGTTCTGATTTTCACCAATCATTGTACTGCCACCTCTTGTGTGGCCTAATTTTTAGGGACCAAATTCAGCTTGTGTCTTCAACATTTGCACACAGCCTTGTCCATGCTTTTAGGACCTTTGAACAAGTGTGGGAAGAGCTATGTCATGATATAAGGAGTGGTGTCCTTACCAGCAGGATCACAGTTCCATCAATTAGGACTGCAATGTCTAAAATTCTCAAACCAGACCCAGAACTAGCCAACTTGATCCACAAAAAATGCACTGGGTTGAGCAACTGGTATGGGCTAATACAAGAGCTTTTTCCAAATGCTAAGTATGTTTATGGTATCATGACTGGGGCAATGGAGCCTTATTTGAAAAAGTTGAGGCATTATGCTGGTGAGTTGCCTTTAGTTACTTCTGATTATGGATCTTCTGAAGGGTGGATAGGAACAAATGTTAGCCCAAAAGTACCTCCAGAATTGGCTACTTACACTGTGCTTCCTCAAATTGGTTATTTTGAATTCATCCCTTTGACAAAGAATAATTTCATATGTGTGGATTCTAAGCCAGTGGGCCTAACTGAAGTGAAGCTTGGAGAGGAGTATGAGATTGTTATGACCACTCCAGCAGGGTTATACAGATATAGGCTAGGGGATGTGGTGAAGGTTGCAGGGTTCCATAACTCAACTCCAAAACTCAAATTTGTTCGACGGAGCGGCCTTCTTCTTACTGTTAACATTGACAAGAACACAGAGAATGATCTACAATTAGCTGTGGAAGCAGCATCAAATTTGCTTTCAGATGAAAAATTGGAAGTTGTTGACTACACTAGCCATGTTGATTTTTCCAAAGAGCCCGGACACTATGTTATATTCTGGGAAATCAGTGGTGAAGCAAGTGAAGAAGTGCTTGGTGAATGTTGCAATTGTTTAGATAAGTCTTTTGTTGATGCTGGCTACACTAGTTCCCGCAAAGTCAAGGGCATTGGTGCCCTTGAACTCCAAGTTGTTCGGAGAGGAACATTCCAGAAGATTCTTGAGCATTTTCTAGAATTAGGAGGTACAGTTAGCCAATTTAAGACTCCAAGATGTGTAGGCACTTATCACAATAAAATATTACAAATATTGATAGAAAATGTTGTGGGAAATTACGTCAGCACTGCTTTCGATTGA 1785 0.4106 MLSLFSFCFLKSFSLSTSKMLEKVEAFNMDKVIEEFEAVTKDAERVQRETLKRILEDNASAEYLLSLGLNGRTDPESFKTCIPVVRHKDLEPYINRMIYGDYSSILTGKPITNMSLSSGTTSGKPKYVPWSDELFETTMQIYQTSFSFRNREFPIKNGKALSFIYSSKHFKTEGGLAAGTATTNLFRDKRYKQAMAALQSQCCSPEEVIFGSDFHQSLYCHLLCGLIFRDQIQLVSSTFAHSLVHAFRTFEQVWEELCHDIRSGVLTSRITVPSIRTAMSKILKPDPELANLIHKKCTGLSNWYGLIQELFPNAKYVYGIMTGAMEPYLKKLRHYAGELPLVTSDYGSSEGWIGTNVSPKVPPELATYTVLPQIGYFEFIPLTKNNFICVDSKPVGLTEVKLGEEYEIVMTTPAGLYRYRLGDVVKVAGFHNSTPKLKFVRRSGLLLTVNIDKNTENDLQLAVEAASNLLSDEKLEVVDYTSHVDFSKEPGHYVIFWEISGEASEEVLGECCNCLDKSFVDAGYTSSRKVKGIGALELQVVRRGTFQKILEHFLELGGTVSQFKTPRCVGTYHNKILQILIENVVGNYVSTAFD* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0969 594 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 20 594 - -
Lan9g0969 594 Coils Coil 29 49 - -
Lan9g0969 594 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 20 594 IPR004993 -
Lan9g0969 594 Pfam GH3 auxin-responsive promoter 35 569 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0969 Lan-Chr9 16337478 16340377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0969 36 591 EF-hand Containing Proteins AT1G23160 37.828 3.51e-134 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0969 K14506 - gmx:100813492 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0666 11 5605882 5608405 Lan9g0969 9 16337478 16340377 LSH
Lan2g0356 2 3368493 3373505 Lan9g0969 9 16337478 16340377 PCT
Lan9g0969 9 16337478 16340377 Lan2g0356 2 3368493 3373505 PCT