Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0666 ATGTCAGAGAATCTGGAAGAGTACACAAACAAAGTGATAGAGGAATTTGAGGCAGTTTCAAAGGATGCTGAGAGGGTTCAAAGGGAAACACTGAAAAGCATTTTGGAAGATAATGCATCAGCAGAATACTTGCTGAGTTTAGGACTCAATGGAAGGACTGACCCTGAGAGTTTCAAGGCATGTGTCCCTCTAGTTACTCACGAGGACTTGGAGCCTTATATCAACAGAATTCTTGCTGGTGAAAAGTCTTCTATTCTCACTAGAAAACCCATCACACACATGGCTTTTAGTTCTGGCACTACTCAAGGTAAGTCAAAATATATACCATGGGATCCTGATAGCATTATGGTGCACTCAAAGCTGATATTTCACACCGCTTTTGCCTTTAGGAACAGAGCGTTCCCCATAAAAAATGGCAAGGTCTTAAGCTTTTCCTACCGCAAGAACCCCACAGAAAATGAAGCCGGTATAAAAGTAGCTACTGCGACAGCCCTTGTGACGGGTGACGAACAGTACACTCCAATAATGGCAGCAATCAACTCACAAGTTTGCAGCCCCCAGGAAGTAACATTGTGTCCTGATTTTGAGCAAGGATTGTACTGCCACTTATTGTGTGGCCTAATTTTCAGGGACCAAATTCAGTTTTTGTATACACCCTTTGCACATAGCCTTGTCAATGCTTTTAGAACCTTAGAACAAGTGTGGGAAGAGCTATGTAATGATTTAAGGGAAGGTGTCCTTAGCAGCAGGGTCACAGACCCATCAGTTAGGACTGCAATGTCTAAAATTCTCAAACCAGACCCTGAGCTAGCCAACTTGATCCACAAAATATGCACAGGGTTGAACAACTGGTATGGGGTGGTACAAGAGCTTTTCCCAAATGCTAAGTATTTGCTTGGGATCATGACTGGGACAATGTTGCCTTATGTGGAAAGGTTAAGGCATTATGCTGGTGAGGTACCTGTGCTGACTTCTGATTATGGTGCTTCTGAAGGGTGGATAGCAGTAAATGTGCATCCAACAGTTCCTCCTGAGTTGGCTTCTTACACTATGCTTCCTCAAATTGGATACTTTGAATTCCTTCCTCTCGCACAGAATAGTATCGCCAAACCAGTGGGCCTAACTGAAGTGAAGGTTGGTGAGGAGTATGAGATTGTTATGACTACTCCAGCAGGGTTATACAGGTATAAGGTAGGAGATGTGGTGAAGGTTACAGGGTTCTATAACTCAACTCCAGAATTCAATTTCGTTCGTCGAAGTAACCTTTTGCTTTCGATTAACGTTGACAAGAACACAGAAAATGATTTGTATATAAGTGTGATGGCAGCATCCAAAGTGTTAGCAAAGGAGAAACTGGATGTTATTGATTTCACTAGCCATGTTGATTTATCTATAGAGCCAGGACACTATGTTATATTCTTAGAAATCAGTGGTGAAGCAAGTGAAGAAGTGCTTAGTGAGTGTTGCAATTGTTTAGACAAATCTTTTATTGAGGCTGGATACGTTACTAACCGCGCAATCAATCTCATTGGGCCCCTTGAACTTCGAGTTGTTAGGAGAGGAACATTCCATAAGATTCTCGAGAGTTCTGTGGGAAGAGGTGCTGCAGTTAGCCAGTTCAAGACACCAAGATGTGTACCCTCTACTAACACACAAGTCATGCAAATATTGACTGAAAATGTTGAGAAGAAGTATAGCAGCACTCATTACAATTGA 1716 0.4219 MSENLEEYTNKVIEEFEAVSKDAERVQRETLKSILEDNASAEYLLSLGLNGRTDPESFKACVPLVTHEDLEPYINRILAGEKSSILTRKPITHMAFSSGTTQGKSKYIPWDPDSIMVHSKLIFHTAFAFRNRAFPIKNGKVLSFSYRKNPTENEAGIKVATATALVTGDEQYTPIMAAINSQVCSPQEVTLCPDFEQGLYCHLLCGLIFRDQIQFLYTPFAHSLVNAFRTLEQVWEELCNDLREGVLSSRVTDPSVRTAMSKILKPDPELANLIHKICTGLNNWYGVVQELFPNAKYLLGIMTGTMLPYVERLRHYAGEVPVLTSDYGASEGWIAVNVHPTVPPELASYTMLPQIGYFEFLPLAQNSIAKPVGLTEVKVGEEYEIVMTTPAGLYRYKVGDVVKVTGFYNSTPEFNFVRRSNLLLSINVDKNTENDLYISVMAASKVLAKEKLDVIDFTSHVDLSIEPGHYVIFLEISGEASEEVLSECCNCLDKSFIEAGYVTNRAINLIGPLELRVVRRGTFHKILESSVGRGAAVSQFKTPRCVPSTNTQVMQILTENVEKKYSSTHYN* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0666 571 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 571 IPR004993 -
Lan11g0666 571 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 571 - -
Lan11g0666 571 Pfam GH3 auxin-responsive promoter 15 548 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0666 Lan-Chr11 5605882 5608405 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0666 1 568 EF-hand Containing Proteins AT1G23160 36.815 2.87e-134 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0666 K14506 - gmx:100813492 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0666 11 5605882 5608405 Lan9g0969 9 16337478 16340377 LSH
Lan2g0356 2 3368493 3373505 Lan11g0666 11 5605882 5608405 PCT
Lan11g0666 11 5605882 5608405 Lan2g0356 2 3368493 3373505 PCT