Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0963 ATGCCCACCACCGATGTCCGCTACGTCTCGCCGCCCATTACGGCCAACAACAACAACTCCTCCACCGTCATCTCCGCCGCCAACGAAGATGACACGTGGGTATGGGCCCAGATCAAATCGGAGGCTCGCCGCGACGCTGAATCGGAACCCGCTTTAGCGAGCTACCTTTATTCAACGATTCTATCGCATTCGTCGCTAGAACAATCCCTATCGTTTCACCTTGGTAACAAGCTTTGTTCATCAACGCTTTTATCCACTCTCCTTTATGATCTTTTCCTCAACGCATTTACCTCTGATCCTTCTCTCCGTTCCGCCGCAATCGCTGACTTACGCGCCGCACGTCAACGTGATCCCGCTTGCGAATCCTTCTCTCACTGTTTCCTTAACTATAAGGGATTCCTCGCTTGCCAGGCTCACCGTGTGACTCACCGGCTTTGGCAGCAGTCGCGTCAGCCATTAGCACTGGCACTGCACTCCCGTATTGCTGATGTTTTTGCAGTGGATATTCACCCGGCAGCCAGGATTGGGAAGGGGGTTCTGTTTGATCATGCAACAGGCGTCGTGGTGGGGGAGACGGCAGTGATTGGGAACAATGTCTCAATTCTGCACCATGTGACGCTGGGTGGGACAGGCAAGGTTGGTGGAGATCGACATCCTAAGATTGAAGATGGGGTGCTTATTGGTGCTGGTGCTACCATTCTAGGAAATGTGAAGATTGGGGAAGGTGCAAAGGTTGGTGCTGGGAGTGTTGTTTTGATAGATGTGCCACCGCGGACCACCGCGGTTGGGAACCCGGCGAGGTTGGTGGGTGGGAAGGAAAAGCCATCTAAGAACAAGGATGTGCCTGGGGAGTCCATGGACCACACTTCCTTCATCTCTGAGTGGTCTGATTATATCATTTGA 903 0.5293 MPTTDVRYVSPPITANNNNSSTVISAANEDDTWVWAQIKSEARRDAESEPALASYLYSTILSHSSLEQSLSFHLGNKLCSSTLLSTLLYDLFLNAFTSDPSLRSAAIADLRAARQRDPACESFSHCFLNYKGFLACQAHRVTHRLWQQSRQPLALALHSRIADVFAVDIHPAARIGKGVLFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIEDGVLIGAGATILGNVKIGEGAKVGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKNKDVPGESMDHTSFISEWSDYII* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0963 300 PANTHER SERINE ACETYLTRANSFERASE 12 300 - -
Lan9g0963 300 CDD LbH_SAT 165 265 IPR045304 -
Lan9g0963 300 Gene3D serine acetyltransferase, domain 1 16 167 IPR042122 -
Lan9g0963 300 SUPERFAMILY Trimeric LpxA-like enzymes 29 270 IPR011004 -
Lan9g0963 300 Pfam Bacterial transferase hexapeptide (six repeats) 218 251 IPR001451 -
Lan9g0963 300 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 227 255 IPR018357 GO:0016740
Lan9g0963 300 MobiDBLite consensus disorder prediction 263 287 - -
Lan9g0963 300 TIGRFAM cysE: serine O-acetyltransferase 108 267 IPR005881 GO:0005737|GO:0006535|GO:0009001
Lan9g0963 300 Gene3D Hexapeptide repeat proteins 168 291 - -
Lan9g0963 300 Pfam Serine acetyltransferase, N-terminal 34 138 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lan9g0963 300 Pfam Hexapeptide repeat of succinyl-transferase 185 201 IPR001451 -
Lan9g0963 300 SMART SATase_N_2_a 34 138 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0963 Lan-Chr9 16148575 16150296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0963 34 269 Miscellaneous Gene Families AT2G17640 57.627 1.27e-89 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0963 K00640 - gmx:547632 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0671 11 5666688 5668818 Lan9g0963 9 16148575 16150296 LSH