Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0671 ATGCTAAGCTACTCTACAATTGTTATGGTTGAATTGAACCGTTACTATCGTTCACCACAAACACTTTGTTCTTCAACACAACAACCCAATAATAGTAATAATATTAATAATAATCACATTCTCTCTAATCCAAACCCTCCTCCATTAATTACCATGCCCTCCGGCGAACTCCGCCACTCATCGCCGCCCATTACGGCCAACAACAACTCCTCCGCCGCCACCGCCGCCTTCGAAGACGATGCCTGGGTGTGGGCCCAGATTAAAGCGGAGGCGCGTCGAGATGCTGAATCTGAACCTGCCCTAGCTAGCTACTTATATTCGACGATTCTATCACATTCTTCGCTTGAACGATCGCTATCGTTTCACCTTGGAAACAAGCTTTGTTCATCAACGCTTCTTTCAACTCTGCTTTATGATCTTTTCCTTAATGCTTTTACTTCTGATCCTTCTCTTCGATCTGCTGCAATAGCTGATTTACGTGCTGCTCGAGAACGTGACCCTGCTTGTATATCATTCTCACACTGTCTCCTTAACTATAAGGGCTTCCTCGCATGCCAGGCGCAACGTGTGGCTCACCGGCTGTGGCAGCAGTCGCGGCAGCCATTGGCACTGGCGCTGCACTCCCGCATAGCAGATGTTTTTGCAGTGGATATTCACCCGGCAGCCAGGATTGGGAAGGGTGTTCTGTTTGATCATGCTACAGGCGTGGTAGTTGGGGAGACGGCAGTGATTGGGAACAATGTCTCGATTCTGCACCATGTGACGCTGGGTGGAACTGGGAAGGTTGGTGGGGATCGGCATCCTAAGATTGAGGATGGTGTGCTTATTGGTGCCGGAGCTACCATTCTGGGGAATGTGAAGATTGGGGAAGGTGCAAAGATTGGTGCTGGGAGTGTTGTTTTGATTGATGTGCCACCACGGACAACTGCAGTTGGGAACCCGGCGAGGTTGGTGGGTGGGAAGGAAACACCATCTAAGCACAAGGATGTCCCTGGGGAATCCATGGACCATACTTCCTTCATCTCTGAGTGGTCAGATTATATCATTTGA 1050 0.4933 MLSYSTIVMVELNRYYRSPQTLCSSTQQPNNSNNINNNHILSNPNPPPLITMPSGELRHSSPPITANNNSSAATAAFEDDAWVWAQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNAFTSDPSLRSAAIADLRAARERDPACISFSHCLLNYKGFLACQAQRVAHRLWQQSRQPLALALHSRIADVFAVDIHPAARIGKGVLFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIEDGVLIGAGATILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKETPSKHKDVPGESMDHTSFISEWSDYII* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0671 349 Pfam Hexapeptide repeat of succinyl-transferase 234 250 IPR001451 -
Lan11g0671 349 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 276 304 IPR018357 GO:0016740
Lan11g0671 349 Pfam Bacterial transferase hexapeptide (six repeats) 267 300 IPR001451 -
Lan11g0671 349 TIGRFAM cysE: serine O-acetyltransferase 157 316 IPR005881 GO:0005737|GO:0006535|GO:0009001
Lan11g0671 349 SUPERFAMILY Trimeric LpxA-like enzymes 78 319 IPR011004 -
Lan11g0671 349 Gene3D Hexapeptide repeat proteins 217 338 - -
Lan11g0671 349 Gene3D serine acetyltransferase, domain 1 65 216 IPR042122 -
Lan11g0671 349 SMART SATase_N_2_a 83 187 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lan11g0671 349 CDD LbH_SAT 214 314 IPR045304 -
Lan11g0671 349 PANTHER SERINE ACETYLTRANSFERASE 69 349 - -
Lan11g0671 349 PANTHER BNAC03G13300D PROTEIN 69 349 - -
Lan11g0671 349 Pfam Serine acetyltransferase, N-terminal 83 187 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0671 Lan-Chr11 5666688 5668818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0671 83 318 Miscellaneous Gene Families AT2G17640 57.203 1.91e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0671 K00640 - gmx:547632 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0671 11 5666688 5668818 Lan9g0963 9 16148575 16150296 LSH